RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 FANCCQ00597 558 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 GPBP1Q86WP2 473 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 NACA2Q9H009 215 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 OR52Z1P0C646 297 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 CBX1P83916 185 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 PTH1RQ03431 593 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 INF2Q27J81 1249 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 E7EVH7 732 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 ARMC9Q7Z3E5 817 aa11.47□□□□□ -0.57
SPTAN1-201ENST00000358161 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 GRAPQ13588 217 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 ADALQ6DHV7 355 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 GRAPLQ8TC17 118 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 PUS3Q9BZE2 481 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 TMOD1P28289 359 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 AMNQ9BXJ7 453 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 FAM204AQ9H8W3 233 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 OVOS2A0A0G2JMS6 1433 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 OVOS2A0A0J9YW53 1432 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 OVOS2Q6IE36 1432 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 XRCC6P12956 609 aaKnown RBP eCLIP11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 TNNI1P19237 187 aa11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-201ENST00000358161 CLTCQ00610 1675 aaKnown RBP11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 CALRP27797 417 aaKnown RBP11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 RAD51AP2Q09MP3 1159 aa11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 FAM47CQ5HY64 1035 aa11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 RAB3IL1Q8TBN0 382 aa11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 SEC62Q99442 399 aaKnown RBP11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 ADPGKQ9BRR6 497 aa11.46□□□□□ -0.58
SPTAN1-201ENST00000358161 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 KCTD2Q14681 263 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 CCDC125Q86Z20 511 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 N4BP1O75113 896 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 NT5C2P49902 561 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 DMP1Q13316 513 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 PLA2G4DQ86XP0 818 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 TMTC1Q8IUR5 882 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 MASTLQ96GX5 879 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 BSDC1Q9NW68 430 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 PCDHA1Q9Y5I3 950 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 LAD1O00515 517 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 TECP42680 631 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 NELFCDQ8IXH7 590 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 ANKS4BQ8N8V4 417 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 DBNDD1Q9H9R9 158 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 TULP4Q9NRJ4 1543 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 hCG_1984214I3L0E3 225 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 ATF7P17544 494 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 ADD2P35612 726 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 LIG4P49917 911 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 XKR9Q5GH70 373 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 TTLL6Q8N841 843 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 ZNF713Q8N859 430 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 SFMBT2Q5VUG0 894 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 MYOCDQ8IZQ8 938 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 IFT81Q8WYA0 676 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
SPTAN1-201ENST00000358161 CLRN2A0PK11 232 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 RPS6KA4O75676 772 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 ATP5DP30049 168 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 MCM6Q14566 821 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 CCDC25Q86WR0 208 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 NSMCE1Q8WV22 266 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 COA1Q9GZY4 146 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 MAGEF1Q9HAY2 307 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 ODF2LQ9ULJ1 636 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 XRCC5P13010 732 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 NAPGQ99747 312 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 CNGA1P29973 690 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 CD19P15391 556 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 ALDH3A1P30838 453 aa11.44□□□□□ -0.58
SPTAN1-201ENST00000358161 YARSP54577 528 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms