RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 DOCK1Q14185 1865 aa19.71■□□□□ 0.75
TPM1-205ENST00000357980 A0A1W2PRG0 241 aa19.7■□□□□ 0.74
TPM1-205ENST00000357980 GPATCH4Q5T3I0 446 aaKnown RBP19.7■□□□□ 0.74
TPM1-205ENST00000357980 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
TPM1-205ENST00000357980 DCAF4Q8WV16 495 aa19.7■□□□□ 0.74
TPM1-205ENST00000357980 SCN4AP35499 1836 aa19.7■□□□□ 0.74
TPM1-205ENST00000357980 NPY5RQ15761 445 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 SKOR2Q2VWA4 1001 aaPredicted RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 PIBF1Q8WXW3 757 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 SCAND2PQ9GZW5 306 aaPredicted RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 TFIP11Q9UBB9 837 aaKnown RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 SSC5DA1L4H1 1573 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 ELP1O95163 1332 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 ASNSP08243 561 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 CSPP1Q1MSJ5 1256 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 MYSM1Q5VVJ2 828 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 SLFN13Q68D06 897 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 GMCL1Q96IK5 515 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 FOXP1Q9H334 677 aaPredicted RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 SH3GLB2Q9NR46 395 aa19.69■□□□□ 0.74
TPM1-205ENST00000357980 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.69■□□□□ 0.74
TPM1-205ENST00000357980 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 BTBD18B2RXH4 712 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 F5H6K3 240 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 SOCS7O14512 581 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 KLRC3Q07444 240 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 SAFBQ15424 915 aaKnown RBP eCLIP19.68■□□□□ 0.74
TPM1-205ENST00000357980 LEO1Q8WVC0 666 aaPredicted RBP19.68■□□□□ 0.74
TPM1-205ENST00000357980 UBA5Q9GZZ9 404 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 ARHGEF10LQ9HCE6 1279 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 GPCPD1Q9NPB8 672 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 CFAP45Q9UL16 551 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 TMX2Q9Y320 296 aa19.68■□□□□ 0.74
TPM1-205ENST00000357980 NDUFB10O96000 172 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 ECE1P42892 770 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 CCDC96Q2M329 555 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 KLHL40Q2TBA0 621 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 KCTD1Q719H9 257 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 NOSTRINQ8IVI9 506 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 GPT2Q8TD30 523 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 ACER1Q8TDN7 264 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 HOOK2Q96ED9 719 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 ZNF396Q96N95 335 aaPredicted RBP19.67■□□□□ 0.74
TPM1-205ENST00000357980 USP28Q96RU2 1077 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 FTOQ9C0B1 505 aaKnown RBP eCLIP19.67■□□□□ 0.74
TPM1-205ENST00000357980 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
TPM1-205ENST00000357980 GADD45BO75293 160 aaPredicted RBP19.67■□□□□ 0.74
TPM1-205ENST00000357980 SLC1A4P43007 532 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 PRAMEF18Q5VWM3 479 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 WWC2Q6AWC2 1192 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 TTBK2Q6IQ55 1244 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 OXER1Q8TDS5 423 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 GPKOWQ92917 476 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TPM1-205ENST00000357980 RRP36Q96EU6 259 aaKnown RBP19.67■□□□□ 0.74
TPM1-205ENST00000357980 GINM1Q9NU53 330 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 BARHL2Q9NY43 387 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 ZNF112Q9UJU3 913 aa19.67■□□□□ 0.74
TPM1-205ENST00000357980 DDX49Q9Y6V7 483 aaKnown RBP19.67■□□□□ 0.74
TPM1-205ENST00000357980 WDR90Q96KV7 1748 aa19.66■□□□□ 0.74
TPM1-205ENST00000357980 NR5A1Q13285 461 aa19.66■□□□□ 0.74
TPM1-205ENST00000357980 GNL2Q13823 731 aaKnown RBP19.66■□□□□ 0.74
TPM1-205ENST00000357980 TYW1BQ6NUM6 668 aa19.66■□□□□ 0.74
TPM1-205ENST00000357980 FAM177A1Q8N128 213 aaPredicted RBP19.66■□□□□ 0.74
TPM1-205ENST00000357980 SPATA32Q96LK8 384 aa19.66■□□□□ 0.74
TPM1-205ENST00000357980 STXBP3O00186 592 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 ADGRF4Q8IZF3 695 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 MTMR8Q96EF0 704 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 PIGSQ96S52 555 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 ZNF341Q9BYN7 854 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 JMJD4Q9H9V9 463 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 PAPPA2Q9BXP8 1791 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 KRT2P35908 639 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 UBE2HP62256 183 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 KIAA1755Q5JYT7 1200 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
TPM1-205ENST00000357980 HEATR3Q7Z4Q2 680 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 HOMER1Q86YM7 354 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 TNFRSF25Q93038 417 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 VAT1LQ9HCJ6 419 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 POLR3EQ9NVU0 708 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 RTEL1Q9NZ71 1219 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 SEC63Q9UGP8 760 aaKnown RBP19.65■□□□□ 0.74
TPM1-205ENST00000357980 RCOR1Q9UKL0 485 aa19.65■□□□□ 0.74
TPM1-205ENST00000357980 RAD21O60216 631 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 INPP5BP32019 993 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 EPHX2P34913 555 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 SLC16A2P36021 539 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 NUP88Q99567 741 aaPredicted RBP19.64■□□□□ 0.73
TPM1-205ENST00000357980 GLIS2Q9BZE0 524 aaPredicted RBP19.64■□□□□ 0.73
TPM1-205ENST00000357980 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 PHIPQ8WWQ0 1821 aa19.64■□□□□ 0.73
TPM1-205ENST00000357980 MBD3O95983 291 aa19.63■□□□□ 0.73
TPM1-205ENST00000357980 CALML3P27482 149 aa19.63■□□□□ 0.73
TPM1-205ENST00000357980 NASPP49321 788 aaPredicted RBP19.63■□□□□ 0.73
TPM1-205ENST00000357980 NLRP5P59047 1200 aa19.63■□□□□ 0.73
TPM1-205ENST00000357980 CEBPZQ03701 1054 aaKnown RBP19.63■□□□□ 0.73
TPM1-205ENST00000357980 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
TPM1-205ENST00000357980 DCPSQ96C86 337 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms