RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
RTN4-204ENST00000357732 ERVK-24P63145 666 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 NEK11Q8NG66 645 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 PUF60Q9UHX1 559 aaKnown RBP19.98■□□□□ 0.79
RTN4-204ENST00000357732 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 A0A1W2PQC6 194 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 ARHGAP25P42331 645 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 IRX5P78411 483 aaPredicted RBP19.97■□□□□ 0.79
RTN4-204ENST00000357732 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
RTN4-204ENST00000357732 NUP88Q99567 741 aaPredicted RBP19.97■□□□□ 0.79
RTN4-204ENST00000357732 ZCCHC17Q9NP64 241 aaKnown RBP19.97■□□□□ 0.79
RTN4-204ENST00000357732 CACNA1SQ13698 1873 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 KCNJ18B7U540 433 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 ORC4O43929 436 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 AMPD2Q01433 879 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 KCNJ12Q14500 433 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 ZNF174Q15697 407 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 ZSCAN26Q16670 478 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 CTCFLQ8NI51 663 aaPredicted RBP19.97■□□□□ 0.79
RTN4-204ENST00000357732 RPGRIP1Q96KN7 1286 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 HAUS4Q9H6D7 363 aa19.97■□□□□ 0.79
RTN4-204ENST00000357732 MYH13Q9UKX3 1938 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 PLEKHA8P1O95397 391 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 CALML3P27482 149 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 SMYD4Q8IYR2 804 aaPredicted RBP19.96■□□□□ 0.79
RTN4-204ENST00000357732 SDR42E1Q8WUS8 393 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 PNKPQ96T60 521 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 MED4Q9NPJ6 270 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 MYO6Q9UM54 1294 aa19.96■□□□□ 0.79
RTN4-204ENST00000357732 A0A0G2JS52 829 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 H3BQF6 201 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 EEF1GP26641 437 aaKnown RBP19.95■□□□□ 0.78
RTN4-204ENST00000357732 CCT6AP40227 531 aaKnown RBP19.95■□□□□ 0.78
RTN4-204ENST00000357732 CHRNDQ07001 517 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 EHBP1Q8NDI1 1231 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 ACRBPQ8NEB7 543 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 CCDC148Q8NFR7 591 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 NELFBQ8WX92 580 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 VIPAS39Q9H9C1 493 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 CICQ96RK0 1608 aaPredicted RBP19.95■□□□□ 0.78
RTN4-204ENST00000357732 PSMD14O00487 310 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 SCG2P13521 617 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 KRT9P35527 623 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 ADGRA1Q86SQ6 560 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 ZSWIM4Q9H7M6 989 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 MYH8P13535 1937 aa19.95■□□□□ 0.78
RTN4-204ENST00000357732 SMIM22K7EJ46 135 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 RPS6KA5O75582 802 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 RPN1P04843 607 aaKnown RBP19.94■□□□□ 0.78
RTN4-204ENST00000357732 CASP1P29466 404 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 KCNB1Q14721 858 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 FAM71BQ8TC56 605 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 NOC3LQ8WTT2 800 aaKnown RBP19.94■□□□□ 0.78
RTN4-204ENST00000357732 SH3GLB2Q9NR46 395 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 PRDM1O75626 825 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 NDUFA10O95299 355 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 IVLP07476 585 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 ACTN2P35609 894 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 CRKLP46109 303 aaKnown RBP19.94■□□□□ 0.78
RTN4-204ENST00000357732 RAD51AP2Q09MP3 1159 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 UBE4AQ14139 1066 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 PFKFB3Q16875 520 aaPredicted RBP19.94■□□□□ 0.78
RTN4-204ENST00000357732 OR8K1Q8NGG5 319 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 DNAJC7Q99615 494 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 PDE11AQ9HCR9 933 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 ABCB6Q9NP58 842 aa19.94■□□□□ 0.78
RTN4-204ENST00000357732 EPN1Q9Y6I3 576 aaPredicted RBP19.94■□□□□ 0.78
RTN4-204ENST00000357732 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 THAP9Q9H5L6 903 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.93■□□□□ 0.785e-6■□□□□ 9.7
RTN4-204ENST00000357732 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 LAMB1P07942 1786 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 A0A0U1RQJ8 604 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 WNT7AO00755 349 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 NLRP5P59047 1200 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 MAP9Q49MG5 647 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 HSP90B2PQ58FF3 399 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 ATRIPQ8WXE1 791 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 VPS16Q9H269 839 aa19.93■□□□□ 0.78
RTN4-204ENST00000357732 A0A1B0GUL6 1792 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 PDS5AQ29RF7 1337 aaKnown RBP19.92■□□□□ 0.78
RTN4-204ENST00000357732 LGALS16A8MUM7 142 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 NTSR2O95665 410 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 KIF5BP33176 963 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 KRT83P78385 493 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 STIM1Q13586 685 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 MCM6Q14566 821 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 CASP8Q14790 479 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 TSR1Q2NL82 804 aaKnown RBP19.92■□□□□ 0.78
RTN4-204ENST00000357732 LEKR1Q6ZMV7 388 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 TRAPPC11Q7Z392 1133 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 MTRQ99707 1265 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 SCN7AQ01118 1682 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 ATP6V1AP38606 617 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 VSNL1P62760 191 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 UBXN1Q04323 297 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 ADSSL1Q8N142 457 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 RETREG2Q8NC44 543 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms