RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 KIF24Q5T7B8 1368 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.395e-7■□□□□ 9.4
SPTBN1-202ENST00000356805 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 CEBPAP49715 358 aaPredicted RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 KIF11P52732 1056 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 HP1BP3Q5SSJ5 553 aaPredicted RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 DRC3Q9H069 523 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 ACEP12821 1306 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 TERF2Q15554 542 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 TTC6Q86TZ1 520 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 CHUKO15111 745 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 GNPATO15228 680 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 TRIM37O94972 964 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 EXOC3O60645 756 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 DEUP1Q05D60 604 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 STAM2O75886 525 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 SERPINB6P35237 376 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 SMYD2Q9NRG4 433 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SPTBN1-202ENST00000356805 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.392e-17■■■■■ 41.8
SPTBN1-202ENST00000356805 SEC24BO95487 1268 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 FBXO41Q8TF61 875 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 PHBP35232 272 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 GOLGA8QA0A0J9YX86 632 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 GOLGA8OA6NCC3 632 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 GOLGA8NF8WBI6 632 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 OR8K1Q8NGG5 319 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 SYNJ2BP-COX16A0A087WUM0 186 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 MAGEA1P43355 309 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 EIF2AQ9BY44 585 aaKnown RBP12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 ZBED4O75132 1171 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 ECE1P42892 770 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 DYNC1I2Q13409 638 aaKnown RBP12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 FAM102BQ5T8I3 360 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 KAZNQ674X7 775 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
SPTBN1-202ENST00000356805 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 NR1I2O75469 434 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 PTPROQ16827 1216 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 HERC4Q5GLZ8 1057 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 GLT8D2Q9H1C3 349 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 CLTAP09496 248 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 PDE11AQ9HCR9 933 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 PPP2R2CQ9Y2T4 447 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 GNA14O95837 355 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 IFNB1P01574 187 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 SLC12A1Q13621 1099 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 HOXA7P31268 230 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 NME8Q8N427 588 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 SAAL1Q96ER3 474 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 SPATA17Q96L03 361 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 TXLNGQ9NUQ3 528 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 DEXIO95424 95 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 EPHB4P54760 987 aa12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-202ENST00000356805 ALS2CLQ60I27 953 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms