RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 SLFN13Q68D06 897 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 AGXT2Q9BYV1 514 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
FDPS-201ENST00000356657 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 DDAH1O94760 285 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 CALM1P0DP23 149 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 CALM2P0DP24 149 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 CALM3P0DP25 149 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 SNHG28P0DPA3 235 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 HSPA8P11142 646 aaKnown RBP18.71■□□□□ 0.59
FDPS-201ENST00000356657 BMP3P12645 472 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 TREML2Q5T2D2 321 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 FAM43AQ8N2R8 423 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 TBC1D32Q96NH3 1257 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.59
FDPS-201ENST00000356657 FDX1P10109 184 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 TAF1CQ15572 869 aaPredicted RBP18.71■□□□□ 0.59
FDPS-201ENST00000356657 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 NOM1Q5C9Z4 860 aaKnown RBP18.71■□□□□ 0.59
FDPS-201ENST00000356657 LBX2Q6XYB7 198 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 CHST3Q7LGC8 479 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 SPICE1Q8N0Z3 855 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
FDPS-201ENST00000356657 ZFYVE28Q9HCC9 887 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 HOXC10Q9NYD6 342 aa18.71■□□□□ 0.59
FDPS-201ENST00000356657 RLFQ13129 1914 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 RAD21O60216 631 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 TRPA1O75762 1119 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 PDHBP11177 359 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 GCLCP48506 637 aaPredicted RBP18.7■□□□□ 0.58
FDPS-201ENST00000356657 STAT2P52630 851 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 COG2Q14746 738 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 ANKRD1Q15327 319 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 COL13A1Q5TAT6 717 aaPredicted RBP18.7■□□□□ 0.58
FDPS-201ENST00000356657 SYNE3Q6ZMZ3 975 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 NFXL1Q6ZNB6 911 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 FAM160B2Q86V87 743 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 MB21D1Q8N884 522 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 SMCR8Q8TEV9 937 aaPredicted RBP18.7■□□□□ 0.58
FDPS-201ENST00000356657 CHURC1Q8WUH1 139 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 FEM1BQ9UK73 627 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
FDPS-201ENST00000356657 KIF5BP33176 963 aa18.69■□□□□ 0.58
FDPS-201ENST00000356657 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
FDPS-201ENST00000356657 RNF186Q9NXI6 227 aa18.69■□□□□ 0.58
FDPS-201ENST00000356657 A0A0G2JMZ2 1700 aa18.69■□□□□ 0.58
FDPS-201ENST00000356657 FLOT1O75955 427 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 EVCP57679 992 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 TROAPQ12815 778 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 RABEP1Q15276 862 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 KIAA1755Q5JYT7 1200 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 FAM83BQ5T0W9 1011 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 ZNF654Q8IZM8 581 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 PRDM10Q9NQV6 1147 aa18.68■□□□□ 0.58
FDPS-201ENST00000356657 TLR2O60603 784 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 PARP1P09874 1014 aaKnown RBP18.67■□□□□ 0.58
FDPS-201ENST00000356657 HERVK_113P62684 666 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 DGKZQ13574 1117 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 CCDC96Q2M329 555 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 Q6ZUG5 572 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 PRPF38AQ8NAV1 312 aaKnown RBP18.67■□□□□ 0.58
FDPS-201ENST00000356657 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
FDPS-201ENST00000356657 SLF1Q9BQI6 1058 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 UPF3BQ9BZI7 483 aaKnown RBP18.67■□□□□ 0.58
FDPS-201ENST00000356657 PDRG1Q9NUG6 133 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
FDPS-201ENST00000356657 APOA5Q6Q788 366 aa18.66■□□□□ 0.58
FDPS-201ENST00000356657 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
FDPS-201ENST00000356657 NID2Q14112 1375 aa18.66■□□□□ 0.58
FDPS-201ENST00000356657 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
FDPS-201ENST00000356657 DSG3P32926 999 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 GNAQP50148 359 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 CRHR2Q13324 411 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 COL9A3Q14050 684 aaPredicted RBP18.65■□□□□ 0.58
FDPS-201ENST00000356657 GRM4Q14833 912 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 TNS4Q8IZW8 715 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 BRF1Q92994 677 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 LZTS2Q9BRK4 669 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 LRRC2Q9BYS8 371 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 CCDC196A0A1B0GTZ2 297 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 SPDYE16A6NNV3 312 aaPredicted RBP18.65■□□□□ 0.58
FDPS-201ENST00000356657 TMEM232C9JQI7 657 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 ZBTB43O43298 467 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 CPA1P15085 419 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 SMARCA1P28370 1054 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 NEK4P51957 841 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 TCEANC2Q96MN5 208 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
FDPS-201ENST00000356657 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
FDPS-201ENST00000356657 ADAMTS5Q9UNA0 930 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 RABGAP1Q9Y3P9 1069 aa18.65■□□□□ 0.58
FDPS-201ENST00000356657 CYP2C8P10632 490 aa18.64■□□□□ 0.57
FDPS-201ENST00000356657 OAZ1P54368 228 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms