RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SFMBT2Q5VUG0 894 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 TGFBRAP1Q8WUH2 860 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 RSAD2Q8WXG1 361 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 NUCKS1Q9H1E3 243 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 HESX1Q9UBX0 185 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 A0A1B0GUL7 405 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 B4E1Z4 1266 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 TBC1D8BQ0IIM8 1120 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 DMP1Q13316 513 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 KARSQ15046 597 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SLC9C1Q4G0N8 1177 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 BBS5Q8N3I7 341 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 IGSF22Q8N9C0 903 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 GRK7Q8WTQ7 553 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 HVCN1Q96D96 273 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 MRRFQ96E11 262 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 NAPGQ99747 312 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 BAG1Q99933 345 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 VPS37BQ9H9H4 285 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 C1orf112Q9NSG2 853 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ZRANB1Q9UGI0 708 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 XPOTO43592 962 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 PHBP35232 272 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 AK2P54819 239 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 MAEAQ7L5Y9 396 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 HDXQ7Z353 690 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 PALM2Q8IXS6 379 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 IFT20Q8IY31 132 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SLFN12Q8IYM2 578 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 CNKSR1Q969H4 720 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 VCX3AQ9NNX9 186 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SEPT10Q9P0V9 454 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 KDM5AP29375 1690 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 RHOXF2BP0C7M4 288 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SEPT14Q6ZU15 432 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 PPP4R1Q8TF05 950 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SKA2Q8WVK7 121 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 FAM89AQ96GI7 184 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 RHOXF2Q9BQY4 288 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 AP5M1Q9H0R1 490 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 NRBP2Q9NSY0 501 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 IRAK4Q9NWZ3 460 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ANGEL1Q9UNK9 670 aaKnown RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 MFSD14BQ5SR56 506 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF772Q68DY9 489 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 CCDC186Q7Z3E2 898 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ANKRD35Q8N283 1001 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 MIPOL1Q8TD10 442 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 PARD3BQ8TEW8 1205 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ARHGEF37A1IGU5 675 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 STMN1P16949 149 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 HERC4Q5GLZ8 1057 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 BSPRYQ5W0U4 402 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 GPT2Q8TD30 523 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 GCNAQ96QF7 691 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 SLC52A2Q9HAB3 445 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ATP8A2Q9NTI2 1148 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 FEZ2Q9UHY8 353 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 KCNH3Q9ULD8 1083 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 V9GY48 417 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-202ENST00000356435 TPH2Q8IWU9 490 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 MMS19Q96T76 1030 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 IFNKQ9P0W0 207 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 PCDHB13Q9Y5F0 798 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 ARAP3Q8WWN8 1544 aa6.1□□□□□ -1.43
PTPRD-202ENST00000356435 K7ENM7 598 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CUTAO60888 179 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 HEXIM1O94992 359 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 MAN1A1P33908 653 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 KRT26Q7Z3Y9 468 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 DPP9Q86TI2 863 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 METTL23Q86XA0 190 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 DDX21Q9NR30 783 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ST7Q9NRC1 585 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 MADDQ8WXG6 1647 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TLR3O15455 904 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TRIM37O94972 964 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CAPN2P17655 700 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 IRX5P78411 483 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 PRPSAP1Q14558 356 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ANO1Q5XXA6 986 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CEP85Q6P2H3 762 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 C10orf67Q8IYJ2 551 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CCDC105Q8IYK2 499 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 IL17RAQ96F46 866 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 LLPHQ9BRT6 129 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 PARP2Q9UGN5 583 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 RPS6KB1P23443 525 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 MAP3K21Q5TCX8 1036 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF790Q6PG37 636 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 C8orf58Q8NAV2 365 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms