RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 MLXIPQ9HAP2 919 aa7.12□□□□□ -1.27
UPF2-201ENST00000356352 METTL14Q9HCE5 456 aaKnown RBP7.12□□□□□ -1.27
UPF2-201ENST00000356352 HOMER3Q9NSC5 361 aa7.12□□□□□ -1.27
UPF2-201ENST00000356352 XPOTO43592 962 aaKnown RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 STX2P32856 288 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 LIG4P49917 911 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 IRX5P78411 483 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 AOC3Q16853 763 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TRIML1Q8N9V2 468 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 GLG1Q92896 1179 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 FAM81BQ96LP2 452 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 LSM14BQ9BX40 385 aaKnown RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 GINS2Q9Y248 185 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SHANK2Q9UPX8 1470 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SGSM2O43147 1006 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 POLR2MP0CAP2 368 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 PSMD6Q15008 389 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 DYMQ7RTS9 669 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 EXOC8Q8IYI6 725 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 FAM193BQ96PV7 902 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 TRIM31Q9BZY9 425 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CCDC68Q9H2F9 335 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 ZNF408Q9H9D4 720 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 MYO1AQ9UBC5 1043 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 HESX1Q9UBX0 185 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TBX22Q9Y458 520 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 NFE2L3Q9Y4A8 694 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CAPN9O14815 690 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 ZBTB7BO15156 539 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 RGS16O15492 202 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 LMNB1P20700 586 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 PPARAQ07869 468 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TFDP1Q14186 410 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 BRD3Q15059 726 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 DBNDD2Q9BQY9 259 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TEKT3Q9BXF9 490 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TM6SF1Q9BZW5 370 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 HYOU1Q9Y4L1 999 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SOS2Q07890 1332 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 DDAH1O94760 285 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SRGAP2BP0DMP2 458 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 HOXA7P31268 230 aaPredicted RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 APBA1Q02410 837 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 FAM102BQ5T8I3 360 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 BBS5Q8N3I7 341 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CABLES1Q8TDN4 633 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CDKL2Q92772 493 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SDCCAG3Q96C92 435 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 KLHL14Q9P2G3 628 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 ZNF532Q9HCE3 1301 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 SMCO2A6NFE2 343 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CLGNO14967 610 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 THAP12O43422 761 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TMOD1P28289 359 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CLNS1AP54105 237 aaKnown RBP7.11□□□□□ -1.27
UPF2-201ENST00000356352 LMNB2Q03252 620 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 CTDSPL2Q05D32 466 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 MAEAQ7L5Y9 396 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TPH2Q8IWU9 490 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TSPYL6Q8N831 410 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TSC1Q92574 1164 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 TRIM11Q96F44 468 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 NRBP2Q9NSY0 501 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 BAG5Q9UL15 447 aa7.11□□□□□ -1.27
UPF2-201ENST00000356352 PPFIA2O75334 1257 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 ATP2B4P23634 1241 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 RBBP5Q15291 538 aaKnown RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 GPBP1Q86WP2 473 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 NELFCDQ8IXH7 590 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 SMAP1Q8IYB5 467 aaPredicted RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 CCDC170Q8IYT3 715 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 CPXCR1Q8N123 301 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 CARD6Q9BX69 1037 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 TYW5A2RUC4 315 aaKnown RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 ERVV-2B6SEH9 535 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 KRT10P13645 584 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 PTPREP23469 700 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 RFC1P35251 1148 aaPredicted RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 BPIFB4P59827 614 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 TIMM10P62072 90 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 TFAP4Q01664 338 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 KRT71Q3SY84 523 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 U2AF1L4Q8WU68 220 aaKnown RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 TGFBRAP1Q8WUH2 860 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 ZNF274Q96GC6 653 aaPredicted RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 JPH2Q9BR39 696 aaPredicted RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 CCPG1Q9ULG6 757 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 MAP3K19Q56UN5 1328 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 ESYT2A0FGR8 921 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 RNASE9P60153 205 aaKnown RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 ASPHQ12797 758 aa7.1□□□□□ -1.27
UPF2-201ENST00000356352 DMP1Q13316 513 aaPredicted RBP7.1□□□□□ -1.27
UPF2-201ENST00000356352 PPP2R5CQ13362 524 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms