RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
SIRPA-201ENST00000356025 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
SIRPA-201ENST00000356025 SLFN14P0C7P3 912 aa13.71□□□□□ -0.22
SIRPA-201ENST00000356025 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.22
SIRPA-201ENST00000356025 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.22
SIRPA-201ENST00000356025 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.22
SIRPA-201ENST00000356025 JADE2Q9NQC1 790 aa13.71□□□□□ -0.22
SIRPA-201ENST00000356025 BTDP43251 543 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 COA7Q96BR5 231 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 EYA3Q99504 573 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 ANKRD2Q9GZV1 360 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
SIRPA-201ENST00000356025 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 SLC16A2P36021 539 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 MORC3Q14149 939 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 PTPROQ16827 1216 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 TUBE1Q9UJT0 475 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 EPS15P42566 896 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 CLCN6P51797 869 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
SIRPA-201ENST00000356025 SPATA1Q5VX52 437 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 GJA10Q969M2 543 aa13.7□□□□□ -0.22
SIRPA-201ENST00000356025 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 CALML3P27482 149 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 CSGALNACT2Q8N6G5 542 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 PSMA7O14818 248 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 MYO1BO43795 1136 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 ZMYND10O75800 440 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 LDHCP07864 332 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 CACNB3P54284 484 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 RNASE9P60153 205 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 ANKRD13CQ8N6S4 541 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 CTIFO43310 598 aaKnown RBP13.69□□□□□ -0.22
SIRPA-201ENST00000356025 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
SIRPA-201ENST00000356025 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 LRRC41Q15345 812 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 NEK11Q8NG66 645 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 ARFGAP3Q9NP61 516 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 FAM207AQ9NSI2 230 aaPredicted RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 LMO7Q8WWI1 1683 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 TROAPQ12815 778 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 GRIK5Q16478 980 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 CALML4Q96GE6 196 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 BMP15O95972 392 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 SLC35F6Q8N357 371 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 CTAGE1Q96RT6 745 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 PIGSQ96S52 555 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 MRPL44Q9H9J2 332 aaKnown RBP13.68□□□□□ -0.22
SIRPA-201ENST00000356025 C5P01031 1676 aa13.68□□□□□ -0.22
SIRPA-201ENST00000356025 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 B4DLN1 442 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
SIRPA-201ENST00000356025 SNAP25P60880 206 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 KRT31Q15323 416 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 PKN1Q16512 942 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 CCDC122Q5T0U0 273 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 CACNA2D4Q7Z3S7 1137 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 USP21Q9UK80 565 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 BCL9O00512 1426 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 LMAN1P49257 510 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 CYP27A1Q02318 531 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 NELFCDQ8IXH7 590 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
SIRPA-201ENST00000356025 RABEP2Q9H5N1 569 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
SIRPA-201ENST00000356025 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
SIRPA-201ENST00000356025 CABP7Q86V35 215 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 KANSL2Q9H9L4 492 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
SIRPA-201ENST00000356025 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
SIRPA-201ENST00000356025 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms