RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ZBTB12Q9Y330 459 aaPredicted RBP29.47■■■□□ 2.31
CLK2-201ENST00000355560 ENTPD3O75355 529 aa29.46■■■□□ 2.31
CLK2-201ENST00000355560 ANO6Q4KMQ2 910 aa29.46■■■□□ 2.31
CLK2-201ENST00000355560 RESP18Q5W5W9 173 aa29.46■■■□□ 2.31
CLK2-201ENST00000355560 HDAC9Q9UKV0 1011 aa29.46■■■□□ 2.31
CLK2-201ENST00000355560 MYH4Q9Y623 1939 aa29.46■■■□□ 2.31
CLK2-201ENST00000355560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.45■■■□□ 2.31
CLK2-201ENST00000355560 SPDYE2BA6NHP3 402 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 SPDYE6P0CI01 402 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 OGFOD1Q8N543 542 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 CCDC148Q8NFR7 591 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 FAM200AQ8TCP9 573 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 BARHL2Q9NY43 387 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 FBXO2Q9UK22 296 aaPredicted RBP29.45■■■□□ 2.31
CLK2-201ENST00000355560 HPSEQ9Y251 543 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 ATRNL1Q5VV63 1379 aa29.45■■■□□ 2.31
CLK2-201ENST00000355560 FRMPD2Q68DX3 1309 aaPredicted RBP29.45■■■□□ 2.31
CLK2-201ENST00000355560 PIK3AP1Q6ZUJ8 805 aa29.45■■■□□ 2.3
CLK2-201ENST00000355560 PDLIM2Q96JY6 352 aa29.45■■■□□ 2.3
CLK2-201ENST00000355560 ADAMTS3O15072 1205 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 PTPREP23469 700 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 SMARCA1P28370 1054 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 SYKP43405 635 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 HOMER1Q86YM7 354 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 BLIDQ8IZY5 108 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 PCDHA4Q9UN74 947 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 FER1L6Q2WGJ9 1857 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 STXBP3O00186 592 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 SNHG28P0DPA3 235 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 CERKLQ49MI3 558 aaPredicted RBP29.44■■■□□ 2.3
CLK2-201ENST00000355560 ASPRV1Q53RT3 343 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 RRP36Q96EU6 259 aaKnown RBP29.44■■■□□ 2.3
CLK2-201ENST00000355560 TAOK3Q9H2K8 898 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 TMOD2Q9NZR1 351 aa29.44■■■□□ 2.3
CLK2-201ENST00000355560 FAM237AA0A1B0GTK4 181 aa29.43■■■□□ 2.3
CLK2-201ENST00000355560 ATP2B2Q01814 1243 aa29.43■■■□□ 2.3
CLK2-201ENST00000355560 FOXP4Q8IVH2 680 aaPredicted RBP29.43■■■□□ 2.3
CLK2-201ENST00000355560 TRIM44Q96DX7 344 aaPredicted RBP29.43■■■□□ 2.3
CLK2-201ENST00000355560 WNT7AO00755 349 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 GRIN1Q05586 938 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 DLGAP5Q15398 846 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 UBA5Q9GZZ9 404 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 SEC63Q9UGP8 760 aaKnown RBP29.42■■■□□ 2.3
CLK2-201ENST00000355560 COL2A1P02458 1487 aaPredicted RBP29.42■■■□□ 2.3
CLK2-201ENST00000355560 PPP4R3BQ5MIZ7 849 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 TTC38Q5R3I4 469 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 TATDN1Q6P1N9 297 aa29.42■■■□□ 2.3
CLK2-201ENST00000355560 ERCC4Q92889 916 aaPredicted RBP29.42■■■□□ 2.3
CLK2-201ENST00000355560 VAT1LQ9HCJ6 419 aa29.41■■■□□ 2.3
CLK2-201ENST00000355560 USP25Q9UHP3 1055 aa29.41■■■□□ 2.3
CLK2-201ENST00000355560 SRPRBQ9Y5M8 271 aaKnown RBP29.41■■■□□ 2.3
CLK2-201ENST00000355560 CLRN2A0PK11 232 aa29.41■■■□□ 2.3
CLK2-201ENST00000355560 SHROOM1Q2M3G4 852 aaPredicted RBP29.41■■■□□ 2.3
CLK2-201ENST00000355560 SPECC1Q5M775 1068 aa29.41■■■□□ 2.3
CLK2-201ENST00000355560 DNAJC25Q9H1X3 360 aa29.41■■■□□ 2.3
CLK2-201ENST00000355560 MORC2Q9Y6X9 1032 aaPredicted RBP29.41■■■□□ 2.3
CLK2-201ENST00000355560 BMP15O95972 392 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 TRAPPC10P48553 1259 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 GALNT17Q6IS24 598 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 AGBL3Q8NEM8 1001 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 TIGD1Q96MW7 591 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 PIGSQ96S52 555 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 CSRNP1Q96S65 589 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 RIOX1Q9H6W3 641 aa29.4■■■□□ 2.3
CLK2-201ENST00000355560 TCP10L2B9ZVM9 353 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 STX1AQ16623 288 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 METTL16Q86W50 562 aaKnown RBP29.39■■■□□ 2.3
CLK2-201ENST00000355560 FAM177A1Q8N128 213 aaPredicted RBP29.39■■■□□ 2.3
CLK2-201ENST00000355560 DAGLBQ8NCG7 672 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 KCNH3Q9ULD8 1083 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 CXCL9Q07325 125 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 ZNF543Q08ER8 600 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 ZNF174Q15697 407 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 ZNF579Q8NAF0 562 aaKnown RBP29.39■■■□□ 2.3
CLK2-201ENST00000355560 RASGRP4Q8TDF6 673 aa29.39■■■□□ 2.3
CLK2-201ENST00000355560 M0R2N6 131 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 NAPAP54920 295 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 CCDC12Q8WUD4 166 aaPredicted RBP29.38■■■□□ 2.29
CLK2-201ENST00000355560 CBX8Q9HC52 389 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 GPCPD1Q9NPB8 672 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 ZNF70Q9UC06 446 aaPredicted RBP29.38■■■□□ 2.29
CLK2-201ENST00000355560 LUZP1Q86V48 1076 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 JDP2Q8WYK2 163 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 SGIP1Q9BQI5 828 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 KANSL2Q9H9L4 492 aa29.38■■■□□ 2.29
CLK2-201ENST00000355560 ZNF165P49910 485 aa29.37■■■□□ 2.29
CLK2-201ENST00000355560 FAM13BQ9NYF5 915 aa29.37■■■□□ 2.29
CLK2-201ENST00000355560 KIAA1468Q9P260 1216 aa29.37■■■□□ 2.29
CLK2-201ENST00000355560 NFKBIEO00221 500 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 GDF11O95390 407 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 CAVIN2O95810 425 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 EEF2P13639 858 aaKnown RBP29.36■■■□□ 2.29
CLK2-201ENST00000355560 TMEM179Q6ZVK1 233 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 ZMYND12Q9H0C1 365 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 PCDHA6Q9UN73 950 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 PCDHA8Q9Y5H6 950 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 SPDYE2Q495Y8 402 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 CSRNP2Q9H175 543 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 BCS1LQ9Y276 419 aa29.36■■■□□ 2.29
CLK2-201ENST00000355560 CCDC194A0A1B0GVG4 234 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms