RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 MRPL11Q9Y3B7 192 aaKnown RBP18.12■□□□□ 0.49
SHTN1-202ENST00000355371 APBA3O96018 575 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 ARL1P40616 181 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 B4GALNT4Q76KP1 1039 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 CMTR1Q8N1G2 835 aaKnown RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 KIFC2Q96AC6 838 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 TRIM7Q9C029 511 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 MIER3Q7Z3K6 550 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 C17orf53Q8N3J3 647 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 FAM207AQ9NSI2 230 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 PCDHA12Q9UN75 941 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 BTBD18B2RXH4 712 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 RAD51AP2Q09MP3 1159 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 PEX26Q7Z412 305 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 RASEFQ8IZ41 740 aa18.11■□□□□ 0.49
SHTN1-202ENST00000355371 PUS3Q9BZE2 481 aaKnown RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-202ENST00000355371 PPP6R2O75170 966 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 TECP42680 631 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 LAD1O00515 517 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 ADORA1P30542 326 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 WHAMMP3Q1A5X7 153 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 GPT2Q8TD30 523 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 E7EVH7 732 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 MTMR3Q13615 1198 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 XDHP47989 1333 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 SPATA1Q5VX52 437 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 TRIM58Q8NG06 486 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 RAB3IL1Q8TBN0 382 aa18.1■□□□□ 0.49
SHTN1-202ENST00000355371 RNF26Q9BY78 433 aaPredicted RBP18.1■□□□□ 0.49
SHTN1-202ENST00000355371 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
SHTN1-202ENST00000355371 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
SHTN1-202ENST00000355371 GOLGA6CA6NDK9 693 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 STK10O94804 968 aaKnown RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 GOLGA6DP0CG33 693 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 RNASE9P60153 205 aaKnown RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 TAF12Q16514 161 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 ADCK5Q3MIX3 580 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 GNPTABQ3T906 1256 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 GOLGA6AQ9NYA3 693 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 POLR2MP0CAP2 368 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 ADKP55263 362 aaKnown RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 YWHAEP62258 255 aaKnown RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 GRM1Q13255 1194 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 CERKLQ49MI3 558 aaPredicted RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
SHTN1-202ENST00000355371 TMC4Q7Z404 712 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 CYP21A2P08686 494 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 NDUFA8P51970 172 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 PKP1Q13835 747 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 USPL1Q5W0Q7 1092 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 DCUN1D2Q6PH85 259 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 SPATA24Q86W54 205 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 CUEDC2Q9H467 287 aa18.09■□□□□ 0.49
SHTN1-202ENST00000355371 FMNL1O95466 1100 aaPredicted RBP18.08■□□□□ 0.49
SHTN1-202ENST00000355371 SLC39A14Q15043 492 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 LONRF3Q496Y0 759 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 FBXO11Q86XK2 927 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 SAR1BQ9Y6B6 198 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 FRMPD2Q68DX3 1309 aaPredicted RBP18.08■□□□□ 0.49
SHTN1-202ENST00000355371 GOLGA6BA6NDN3 693 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 N4BP1O75113 896 aaKnown RBP18.08■□□□□ 0.49
SHTN1-202ENST00000355371 CFAP157Q5JU67 520 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 DAAM2Q86T65 1068 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 DDX25Q9UHL0 483 aaKnown RBP18.08■□□□□ 0.49
SHTN1-202ENST00000355371 CLIC4Q9Y696 253 aa18.08■□□□□ 0.49
SHTN1-202ENST00000355371 ERBB3P21860 1342 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 STAT1P42224 750 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 CUL4AQ13619 759 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 RPN1P04843 607 aaKnown RBP18.08■□□□□ 0.48
SHTN1-202ENST00000355371 PRR16Q569H4 304 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 CCDC117Q8IWD4 279 aaPredicted RBP18.08■□□□□ 0.48
SHTN1-202ENST00000355371 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 H0YCG3 227 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 FOSP01100 380 aaPredicted RBP18.08■□□□□ 0.48
SHTN1-202ENST00000355371 INTS8Q75QN2 995 aaKnown RBP18.08■□□□□ 0.48
SHTN1-202ENST00000355371 TRIM6Q9C030 488 aaPredicted RBP18.08■□□□□ 0.48
SHTN1-202ENST00000355371 ASIC3Q9UHC3 531 aa18.08■□□□□ 0.48
SHTN1-202ENST00000355371 ZNF500O60304 480 aaPredicted RBP18.07■□□□□ 0.48
SHTN1-202ENST00000355371 HPDP32754 393 aaPredicted RBP18.07■□□□□ 0.48
SHTN1-202ENST00000355371 ADD2P35612 726 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 APOA5Q6Q788 366 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 TAOK1Q7L7X3 1001 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 CCDC17Q96LX7 622 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 NLRC4Q9NPP4 1024 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 PANK4Q9NVE7 773 aa18.07■□□□□ 0.48
SHTN1-202ENST00000355371 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms