RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MED15Q96RN5 788 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 MAD2L2Q9UI95 211 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 PLCG2P16885 1265 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 MCM7P33993 719 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 E2F4Q16254 413 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 CRY2Q49AN0 593 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 TRMT44Q8IYL2 757 aaKnown RBP25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 CD209Q9NNX6 404 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 SAMSN1Q9NSI8 373 aaKnown RBP25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 IL1R1P14778 569 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 HMGB2P26583 209 aaKnown RBP25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 SLF2Q8IX21 1173 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 RBM17Q96I25 401 aaKnown RBP25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 CTAGE1Q96RT6 745 aa25.27■■□□□ 1.64
NKX2-1-201ENST00000354822 A0A1B0GTH6 734 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 STX10O60499 249 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 VEGFAP15692 232 aaPredicted RBP25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 TXLNAP40222 546 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 GPSM2P81274 684 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 CUL4BQ13620 913 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 DAGLBQ8NCG7 672 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 ERO1AQ96HE7 468 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 RTFDC1Q9BY42 306 aaPredicted RBP25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 GGA1Q9UJY5 639 aa25.26■■□□□ 1.63
NKX2-1-201ENST00000354822 BBOX1O75936 387 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 SLC4A8Q2Y0W8 1093 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 STAG2Q8N3U4 1231 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 GPR75-ASB3A0A0A6YYF3 556 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 USP17L3A6NCW0 530 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 USP17L4A6NCW7 530 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 SLU7O95391 586 aaKnown RBP25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 HSP90AA4PQ58FG1 418 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 USP17L1Q7RTZ2 530 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 HOMER1Q86YM7 354 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 BAG1Q99933 345 aaPredicted RBP25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 L2HGDHQ9H9P8 463 aa25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 CGNQ9P2M7 1197 aaKnown RBP25.25■■□□□ 1.63
NKX2-1-201ENST00000354822 SYNRGQ9UMZ2 1314 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 GOLGA6L9A6NEM1 432 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 GTPBP6O43824 516 aaPredicted RBP25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 UFL1O94874 794 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 ETF1P62495 437 aaKnown RBP25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 GRIK5Q16478 980 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 C4orf32Q8N8J7 132 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 FAM163AQ96GL9 167 aaPredicted RBP25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 BAZ2BQ9UIF8 2168 aaKnown RBP25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 CCDC194A0A1B0GVG4 234 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 PALM3A6NDB9 673 aaPredicted RBP25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 PPP1R3GB7ZBB8 358 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 PDXDC2PQ6P474 469 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 TMEM47Q9BQJ4 181 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 RMND1Q9NWS8 449 aa25.24■■□□□ 1.63
NKX2-1-201ENST00000354822 M0R2N6 131 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 RASA1P20936 1047 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 BTDP43251 543 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 IL17AQ16552 155 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 PPP4R3BQ5MIZ7 849 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 SYT10Q6XYQ8 523 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 TMEM139Q8IV31 216 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 MAPKAPK5Q8IW41 473 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 BARHL2Q9NY43 387 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 PHLPP2Q6ZVD8 1323 aa25.23■■□□□ 1.63
NKX2-1-201ENST00000354822 CD44P16070 742 aaKnown RBP25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 CDKAL1Q5VV42 579 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 C16orf86Q6ZW13 317 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 SLC51AQ86UW1 340 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 TBC1D22AQ8WUA7 517 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 PODXL2Q9NZ53 605 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 ZNF215Q9UL58 517 aaPredicted RBP25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 STX8Q9UNK0 236 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 LAD1O00515 517 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 TXNRD1Q16881 649 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 FILIP1LQ4L180 1135 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 TC2NQ8N9U0 490 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 GPKOWQ92917 476 aaPredicted RBP eCLIP25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 NAV1Q8NEY1 1877 aa25.22■■□□□ 1.63
NKX2-1-201ENST00000354822 KLHL10Q6JEL2 608 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 SMARCA1P28370 1054 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 CDK8P49336 464 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 DDR1Q08345 913 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 DTHD1Q6ZMT9 781 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 REXO1L1PQ8IX06 675 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 TEX11Q8IYF3 940 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 NEDD1Q8NHV4 660 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 CCDC12Q8WUD4 166 aaPredicted RBP25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 SPZ1Q9BXG8 430 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 PCDHA6Q9UN73 950 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 PCDHA8Q9Y5H6 950 aa25.21■■□□□ 1.63
NKX2-1-201ENST00000354822 CASP1P29466 404 aa25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 SAP30BPQ9UHR5 308 aaKnown RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 FAM205AQ6ZU69 1335 aa25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 POLRMTO00411 1230 aaKnown RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 HOXA10P31260 410 aaPredicted RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 SEMA3FQ13275 785 aa25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 WWC2Q6AWC2 1192 aa25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 APTXQ7Z2E3 356 aaKnown RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 GPR101Q96P66 508 aaPredicted RBP25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 EYA3Q99504 573 aa25.2■■□□□ 1.62
NKX2-1-201ENST00000354822 STXBP3O00186 592 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms