RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ANGEL2Q5VTE6 544 aaKnown RBP23.69■■□□□ 1.38
TRIM4-202ENST00000354241 SIAH1Q8IUQ4 282 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 TEPSINQ96N21 525 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 UBA5Q9GZZ9 404 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 VEGFAP15692 232 aaPredicted RBP23.68■■□□□ 1.38
TRIM4-202ENST00000354241 ZNF543Q08ER8 600 aa23.68■■□□□ 1.38
TRIM4-202ENST00000354241 GPR162Q16538 588 aa23.68■■□□□ 1.38
TRIM4-202ENST00000354241 CAVIN1Q6NZI2 390 aaKnown RBP23.68■■□□□ 1.38
TRIM4-202ENST00000354241 DEFB129Q9H1M3 183 aa23.68■■□□□ 1.38
TRIM4-202ENST00000354241 FOXP1Q9H334 677 aaPredicted RBP23.68■■□□□ 1.38
TRIM4-202ENST00000354241 VAT1LQ9HCJ6 419 aa23.68■■□□□ 1.38
TRIM4-202ENST00000354241 ZBTB21Q9ULJ3 1066 aa23.68■■□□□ 1.38
TRIM4-202ENST00000354241 ISY1Q9ULR0 285 aaKnown RBP23.68■■□□□ 1.38
TRIM4-202ENST00000354241 SMARCA1P28370 1054 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 NOSTRINQ8IVI9 506 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 GPKOWQ92917 476 aaPredicted RBP eCLIP23.67■■□□□ 1.38
TRIM4-202ENST00000354241 LMOD1P29536 600 aaPredicted RBP23.67■■□□□ 1.38
TRIM4-202ENST00000354241 KRT2P35908 639 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 NLRP5P59047 1200 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 HOMER1Q86YM7 354 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 APOBEC3FQ8IUX4 373 aaKnown RBP23.67■■□□□ 1.38
TRIM4-202ENST00000354241 OXER1Q8TDS5 423 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 RRP36Q96EU6 259 aaKnown RBP23.67■■□□□ 1.38
TRIM4-202ENST00000354241 BRMS1Q9HCU9 246 aa23.67■■□□□ 1.38
TRIM4-202ENST00000354241 ATAD5Q96QE3 1844 aa23.66■■□□□ 1.38
TRIM4-202ENST00000354241 MAP3K10Q02779 954 aa23.66■■□□□ 1.38
TRIM4-202ENST00000354241 NR5A1Q13285 461 aa23.66■■□□□ 1.38
TRIM4-202ENST00000354241 SLFN13Q68D06 897 aa23.66■■□□□ 1.38
TRIM4-202ENST00000354241 KCTD1Q719H9 257 aa23.66■■□□□ 1.38
TRIM4-202ENST00000354241 CAP2P40123 477 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 GPATCH4Q5T3I0 446 aaKnown RBP23.65■■□□□ 1.38
TRIM4-202ENST00000354241 HEATR3Q7Z4Q2 680 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 GGA3Q9NZ52 723 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 RTEL1Q9NZ71 1219 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 SEC63Q9UGP8 760 aaKnown RBP23.65■■□□□ 1.38
TRIM4-202ENST00000354241 RCOR1Q9UKL0 485 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 CLIC4Q9Y696 253 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 GOLGA6L4A6NEF3 574 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 GSE1Q14687 1217 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 WWC2Q6AWC2 1192 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 DCAF4Q8WV16 495 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 PIGSQ96S52 555 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 RIOX1Q9H6W3 641 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 ARHGEF10LQ9HCE6 1279 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 SH3GLB2Q9NR46 395 aa23.65■■□□□ 1.38
TRIM4-202ENST00000354241 SLC1A4P43007 532 aa23.64■■□□□ 1.37
TRIM4-202ENST00000354241 HIRAP54198 1017 aaPredicted RBP23.64■■□□□ 1.37
TRIM4-202ENST00000354241 TTBK2Q6IQ55 1244 aa23.64■■□□□ 1.37
TRIM4-202ENST00000354241 STK38Q15208 465 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 NBPF12Q5TAG4 269 aaPredicted RBP23.63■■□□□ 1.37
TRIM4-202ENST00000354241 GMCL1P1Q8NEA9 526 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 POLR3EQ9NVU0 708 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.63■■□□□ 1.37
TRIM4-202ENST00000354241 A0A1W2PRG0 241 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 F5H6K3 240 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 KLRC3Q07444 240 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 BARHL2Q9NY43 387 aa23.63■■□□□ 1.37
TRIM4-202ENST00000354241 SLC16A2P36021 539 aa23.62■■□□□ 1.37
TRIM4-202ENST00000354241 CCDC148Q8NFR7 591 aa23.62■■□□□ 1.37
TRIM4-202ENST00000354241 PGBD1Q96JS3 809 aa23.62■■□□□ 1.37
TRIM4-202ENST00000354241 ADARB2Q9NS39 739 aaKnown RBP23.62■■□□□ 1.37
TRIM4-202ENST00000354241 POLR2AP24928 1970 aaKnown RBP23.62■■□□□ 1.37
TRIM4-202ENST00000354241 PHF20L1A8MW92 1017 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 STXBP3O00186 592 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 NDUFB10O96000 172 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 CALML3P27482 149 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 ECE1P42892 770 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
TRIM4-202ENST00000354241 NPY5RQ15761 445 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 ADGRF4Q8IZF3 695 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 LINC00301Q8NCQ3 95 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 TMEM63CQ9P1W3 806 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 YEATS4O95619 227 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 ASNSP08243 561 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 TYW1BQ6NUM6 668 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 DPY19L2Q6NUT2 758 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 ACER1Q8TDN7 264 aa23.61■■□□□ 1.37
TRIM4-202ENST00000354241 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
TRIM4-202ENST00000354241 PRAMEF18Q5VWM3 479 aa23.6■■□□□ 1.37
TRIM4-202ENST00000354241 BICD2Q8TD16 824 aa23.6■■□□□ 1.37
TRIM4-202ENST00000354241 GMCL1Q96IK5 515 aa23.6■■□□□ 1.37
TRIM4-202ENST00000354241 NUP88Q99567 741 aaPredicted RBP23.6■■□□□ 1.37
TRIM4-202ENST00000354241 JMJD4Q9H9V9 463 aa23.6■■□□□ 1.37
TRIM4-202ENST00000354241 SYNPO2Q9UMS6 1093 aa23.6■■□□□ 1.37
TRIM4-202ENST00000354241 ME1P48163 572 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 NAPAP54920 295 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 DCAF15Q66K64 600 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 SYAP1Q96A49 352 aaPredicted RBP23.59■■□□□ 1.37
TRIM4-202ENST00000354241 TMX2Q9Y320 296 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 SPTLC2O15270 562 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 RILPL1Q5EBL4 403 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 BLIDQ8IZY5 108 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 KCNG4Q8TDN1 519 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 CCDC12Q8WUD4 166 aaPredicted RBP23.59■■□□□ 1.37
TRIM4-202ENST00000354241 HOOK2Q96ED9 719 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 GOPCQ9HD26 462 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 PCDHA4Q9UN74 947 aa23.59■■□□□ 1.37
TRIM4-202ENST00000354241 FAM205CA6NFA0 338 aa23.58■■□□□ 1.37
TRIM4-202ENST00000354241 TOB1P50616 345 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms