RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 GAKO14976 1311 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 GPR75-ASB3A0A0A6YYF3 556 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 PPEF1O14829 653 aaPredicted RBP4.21□□□□□ -1.73
RNF38-203ENST00000353739 KCNQ2O43526 872 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 ONECUT3O60422 494 aaPredicted RBP4.21□□□□□ -1.73
RNF38-203ENST00000353739 SLU7O95391 586 aaKnown RBP4.21□□□□□ -1.73
RNF38-203ENST00000353739 TFAP4Q01664 338 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 DPYDQ12882 1025 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 NCAPHQ15003 741 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 SEPT2Q15019 361 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 TEX11Q8IYF3 940 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 RASSF8Q8NHQ8 419 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 SYMPKQ92797 1274 aaKnown RBP4.21□□□□□ -1.73
RNF38-203ENST00000353739 ARID3AQ99856 593 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 SENP2Q9HC62 589 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 BARHL2Q9NY43 387 aa4.21□□□□□ -1.73
RNF38-203ENST00000353739 AKR1B15C9JRZ8 316 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 BIN1O00499 593 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 RIOK3O14730 519 aaKnown RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 KIF20AO95235 890 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 BTDP43251 543 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PAK1Q13153 545 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 NONOQ15233 471 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNF38-203ENST00000353739 CCDC144BQ3MJ40 725 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 JAKMIP3Q5VZ66 844 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 HOMER1Q86YM7 354 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 ZNF397Q8NF99 534 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 NEDD1Q8NHV4 660 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 DHX58Q96C10 678 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 CALML4Q96GE6 196 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 AIFM3Q96NN9 605 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 CLIC6Q96NY7 704 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 NUP58Q9BVL2 599 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 THAP9Q9H5L6 903 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 TFCP2L1Q9NZI6 479 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 DNAI1Q9UI46 699 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PCDHA5Q9Y5H7 936 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 COL2A1P02458 1487 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 G3V3G9 751 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PLEKHA8P1O95397 391 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 NPR1P16066 1061 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 TM4SF1P30408 202 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 CASQ1P31415 396 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 GUCY1A2P33402 732 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 COBLL1Q53SF7 1204 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 DCAF8Q5TAQ9 597 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 CREBRFQ8IUR6 639 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 EHBP1Q8NDI1 1231 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 ANKRD7Q92527 254 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 BAG1Q99933 345 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 MYO1AQ9UBC5 1043 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 SRP68Q9UHB9 627 aaKnown RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 SYNPO2Q9UMS6 1093 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 TTF2Q9UNY4 1162 aaKnown RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 A0A1B0GTH6 734 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 H7C1D1 291 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 SERPINB2P05120 415 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 TUBBP07437 444 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 EEF1GP26641 437 aaKnown RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 GPSM2P81274 684 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 NFIXQ14938 502 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 RRAGBQ5VZM2 374 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 RCSD1Q6JBY9 416 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 FOXR2Q6PJQ5 311 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PIK3AP1Q6ZUJ8 805 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 C3orf67Q6ZVT6 689 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 KCTD17Q8N5Z5 321 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 SUPT20HQ8NEM7 779 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 DHTKD1Q96HY7 919 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 RTFDC1Q9BY42 306 aaPredicted RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 TRIM34Q9BYJ4 488 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 STK17AQ9UEE5 414 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 LIMA1Q9UHB6 759 aaKnown RBP4.21□□□□□ -1.74
RNF38-203ENST00000353739 KDM3AQ9Y4C1 1321 aa4.21□□□□□ -1.74
RNF38-203ENST00000353739 PSMA7O14818 248 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CCDC175P0C221 793 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 GCFC2P16383 781 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 ZNF18P17022 549 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NAPAP54920 295 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TBX2Q13207 712 aaPredicted RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 PRR5LQ6MZQ0 368 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CNNM4Q6P4Q7 775 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NLGN1Q8N2Q7 840 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 SRBD1Q8N5C6 995 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 MNS1Q8NEH6 495 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 SH3RF3Q8TEJ3 882 aaPredicted RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 FBXW7Q969H0 707 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CCDC17Q96LX7 622 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CCSER1Q9C0I3 900 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 EHD4Q9H223 541 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TMX1Q9H3N1 280 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CD209Q9NNX6 404 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NRBP1Q9UHY1 535 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 MAD2L2Q9UI95 211 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NFE2L3Q9Y4A8 694 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TACC3Q9Y6A5 838 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 LTBP1Q14766 1721 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 KLRG2A4D1S0 409 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms