RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRIM44Q96DX7 344 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-203ENST00000350034 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 CLIC6Q96NY7 704 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 GMLQ99445 158 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-203ENST00000350034 DHX36Q9H2U1 1008 aaKnown RBP7.94□□□□□ -1.14
TRIM55-203ENST00000350034 RIOX1Q9H6W3 641 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 DNAJC18Q9H819 358 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 ANO10Q9NW15 660 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 FAM198AQ9UFP1 575 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 USP25Q9UHP3 1055 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 TUBE1Q9UJT0 475 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
TRIM55-203ENST00000350034 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 STX8Q9UNK0 236 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 ATRNL1Q5VV63 1379 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 TNRC18O15417 2968 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 STXBP3O00186 592 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 WNT7AO00755 349 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PPIP5K2O43314 1243 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ENTPD3O75355 529 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ADCY5O95622 1261 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 VIL1P09327 827 aaKnown RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PARP1P09874 1014 aaKnown RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PDHBP11177 359 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF165P49910 485 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ATP2C1P98194 919 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 MDM2Q00987 491 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 GRIN1Q05586 938 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PPP4R3BQ5MIZ7 849 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 TTC38Q5R3I4 469 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 WWC2Q6AWC2 1192 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 KRBA2Q6ZNG9 492 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 C11orf57Q6ZUT1 292 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 LUZP1Q86V48 1076 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ZSCAN30Q86W11 494 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 FOXP4Q8IVH2 680 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 CCDC148Q8NFR7 591 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 FERMT2Q96AC1 680 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 SDF4Q9BRK5 362 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 DNAJC25Q9H1X3 360 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 BARHL2Q9NY43 387 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF219Q9P2Y4 722 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-203ENST00000350034 KCNH3Q9ULD8 1083 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PCDHAC2Q9Y5I4 1007 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 PITPNM2Q9BZ72 1349 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 SCN9AQ15858 1988 aa7.93□□□□□ -1.14
TRIM55-203ENST00000350034 MYH1P12882 1939 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 ESYT2A0FGR8 921 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 DDTLA6NHG4 134 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-203ENST00000350034 USP17L5A8MUK1 530 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 hCG_1984214I3L0E3 225 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 TTLL1O95922 423 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 TGFB2P61812 414 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 CFAP100Q494V2 611 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 LONRF3Q496Y0 759 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 TATDN1Q6P1N9 297 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 RSBN1LQ6PCB5 846 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-203ENST00000350034 USP17L2Q6R6M4 530 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 SARM1Q6SZW1 724 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 RASGRP2Q7LDG7 609 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF713Q8N859 430 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-203ENST00000350034 C4orf32Q8N8J7 132 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
TRIM55-203ENST00000350034 MKL1Q969V6 931 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 BPIFA3Q9BQP9 254 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 ZMYND12Q9H0C1 365 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 FAM13BQ9NYF5 915 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.92□□□□□ -1.14
TRIM55-203ENST00000350034 NYAP2Q9P242 653 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 PI4KBQ9UBF8 816 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 CCDC39Q9UFE4 941 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 PCDHA6Q9UN73 950 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 PCDHA8Q9Y5H6 950 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 ADAMTSL1Q8N6G6 1762 aa7.92□□□□□ -1.14
TRIM55-203ENST00000350034 GREB1LQ9C091 1923 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 ACTN4O43707 911 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 GOLGA8HP0CJ92 632 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 HSPA1AP0DMV8 641 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 HSPA1BP0DMV9 641 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 CLCN1P35523 988 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 SARSP49591 514 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 CACNB3P54284 484 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 NLRP12P59046 1061 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF543Q08ER8 600 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF174Q15697 407 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 NT5DC1Q5TFE4 455 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 ARL6IP4Q66PJ3 421 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 PIK3AP1Q6ZUJ8 805 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 USP49Q70CQ1 688 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 DHX40Q8IX18 779 aaKnown RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 CEP57L1Q8IYX8 460 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 MTMR8Q96EF0 704 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 RRP36Q96EU6 259 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms