RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 RNF34Q969K3 372 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 PLPPR2Q96GM1 343 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 SEMA6BQ9H3T3 888 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 GRPEL1Q9HAV7 217 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 C1GALT1Q9NS00 363 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 IGSF5Q9NSI5 407 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 CHMP5Q9NZZ3 219 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 FAM95CA0A1B0GW59 222 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 F13A1P00488 732 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 NFICP08651 508 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 FSTP19883 344 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 HDLBPQ00341 1268 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 PPM1JQ5JR12 505 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 PRSS36Q5K4E3 855 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 BNC2Q6ZN30 1099 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 YIPF2Q9BWQ6 316 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 LRRC3Q9BY71 257 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 ARHGEF28Q8N1W1 1705 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 USP19O94966 1318 aa9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-204ENST00000349311 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.88
UBE2D3-204ENST00000349311 MINDY4BA8MYZ0 360 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 OFD1O75665 1012 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 EIF4A3P38919 411 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 RGS3P49796 1198 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 NFIAQ12857 509 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 MAP7Q14244 749 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 ISL2Q96A47 359 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 KCNF1Q9H3M0 494 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 PRKAG2Q9UGJ0 569 aa9.52□□□□□ -0.89
UBE2D3-204ENST00000349311 GSC2O15499 205 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 RACK1P63244 317 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 CCDC173Q0VFZ6 552 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 SKOR2Q2VWA4 1001 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 FAM196AQ6ZSG2 479 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 HDXQ7Z353 690 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 PANK2Q9BZ23 570 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 WNT10AQ9GZT5 417 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 SLKQ9H2G2 1235 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 PCOLCE2Q9UKZ9 415 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 KNDC1Q76NI1 1749 aa9.51□□□□□ -0.89
UBE2D3-204ENST00000349311 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 DYNC1LI2O43237 492 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 CAP2P40123 477 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 IDI1Q13907 227 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 CNGB1Q14028 1251 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 WIPI1Q5MNZ9 446 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 UTP14CQ5TAP6 766 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 GOLM1Q8NBJ4 401 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 ELMO3Q96BJ8 720 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 DBNDD2Q9BQY9 259 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 CSADQ9Y600 493 aa9.5□□□□□ -0.89
UBE2D3-204ENST00000349311 RIMS1Q86UR5 1692 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 RAB6AP20340 208 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 LMNB1P20700 586 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 FAM160A1Q05DH4 1040 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 RAD51AP2Q09MP3 1159 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 MPP2Q14168 576 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 ZNF394Q53GI3 561 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 PAOXQ6QHF9 649 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 UBE3DQ7Z6J8 389 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 SHISA5Q8N114 240 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 ANP32BQ92688 251 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 JARID2Q92833 1246 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 PIDD1Q9HB75 910 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 CGNL1Q0VF96 1302 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
UBE2D3-204ENST00000349311 MYOM1P52179 1685 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 A0A0U1RQG5 324 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 RXRBP28702 533 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 ADMP35318 185 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 ZAR1Q86SH2 424 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 NT5C1AQ9BXI3 368 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 C14orf93Q9H972 538 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 TNRQ92752 1358 aa9.48□□□□□ -0.89
UBE2D3-204ENST00000349311 MSNP26038 577 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 TNNT2P45379 298 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms