RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
PTPRO-202ENST00000348962 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
PTPRO-202ENST00000348962 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
PTPRO-202ENST00000348962 SELENOSQ9BQE4 189 aa17.11■□□□□ 0.33
PTPRO-202ENST00000348962 PUS3Q9BZE2 481 aaKnown RBP17.11■□□□□ 0.33
PTPRO-202ENST00000348962 USP6P35125 1406 aa17.11■□□□□ 0.33
PTPRO-202ENST00000348962 SH3BP5O60239 455 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 NLRP12P59046 1061 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 FANCCQ00597 558 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 MAGEA1P43355 309 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 POLA2Q14181 598 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 NLRP10Q86W26 655 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 CLUL1Q15846 466 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 CCT6BQ92526 530 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
PTPRO-202ENST00000348962 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
PTPRO-202ENST00000348962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPRO-202ENST00000348962 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
PTPRO-202ENST00000348962 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 KCNQ4P56696 695 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 CCDC6Q16204 474 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 CLEC4GQ6UXB4 293 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ZMYND15Q9H091 742 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TTLL1O95922 423 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ADD1P35611 737 aaKnown RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 STAMQ92783 540 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ST7Q9NRC1 585 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
PTPRO-202ENST00000348962 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 SMIM23A6NLE4 172 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TECP42680 631 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ANKS4BQ8N8V4 417 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 PIGBQ92521 554 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 SYT10Q6XYQ8 523 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 TBC1D31Q96DN5 1066 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 USTQ9Y2C2 406 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 PALLDQ8WX93 1383 aa17.09■□□□□ 0.33
PTPRO-202ENST00000348962 ATP7BP35670 1465 aa17.08■□□□□ 0.33
PTPRO-202ENST00000348962 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.33
PTPRO-202ENST00000348962 ANO3Q9BYT9 981 aa17.08■□□□□ 0.33
PTPRO-202ENST00000348962 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.33
PTPRO-202ENST00000348962 PSMC4P43686 418 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GABPAQ06546 454 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GRAPQ13588 217 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 TFDP1Q14186 410 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.32
PTPRO-202ENST00000348962 MASTLQ96GX5 879 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 KCNK9Q9NPC2 374 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GEN1Q17RS7 908 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 ABI1Q8IZP0 508 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 MIS12Q9H081 205 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 HESX1Q9UBX0 185 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 PRKAG2Q9UGJ0 569 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GIPC1O14908 333 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.32
PTPRO-202ENST00000348962 N4BP1O75113 896 aaKnown RBP17.08■□□□□ 0.32
PTPRO-202ENST00000348962 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 SPICE1Q8N0Z3 855 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
PTPRO-202ENST00000348962 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
PTPRO-202ENST00000348962 SSH2Q76I76 1423 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 CYP2J2P51589 502 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 DMP1Q13316 513 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-202ENST00000348962 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-202ENST00000348962 ABT1Q9ULW3 272 aaKnown RBP17.07■□□□□ 0.32
PTPRO-202ENST00000348962 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 ATP5DP30049 168 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 ADORA1P30542 326 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 ARHGAP44Q17R89 818 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 SYCE1Q8N0S2 351 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms