RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GSTA2P09210 222 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 PDXDC1Q6P996 788 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 PAWRQ96IZ0 340 aaKnown RBP21.22■□□□□ 0.99
HDAC4-201ENST00000345617 ANKFY1Q9P2R3 1169 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 NME9Q86XW9 330 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 XPO4Q9C0E2 1151 aaKnown RBP21.22■□□□□ 0.99
HDAC4-201ENST00000345617 RAB20Q9NX57 234 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 ARHGEF35A5YM69 484 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 ATF2P15336 505 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
HDAC4-201ENST00000345617 IFT88Q13099 833 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 RETREG2Q8NC44 543 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 TSC22D3Q99576 134 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 SLF1Q9BQI6 1058 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 TRIM11Q96F44 468 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 CREB3O43889 395 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 GFAPP14136 432 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 GPTP24298 496 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 PCYT1AP49585 367 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 ATP1A2P50993 1020 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 ANKRD12Q6UB98 2062 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 RINT1Q6NUQ1 792 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 RSBN1LQ6PCB5 846 aaPredicted RBP21.21■□□□□ 0.99
HDAC4-201ENST00000345617 STAM2O75886 525 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 LETM2Q2VYF4 491 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 CALR3Q96L12 384 aaKnown RBP21.21■□□□□ 0.99
HDAC4-201ENST00000345617 INTS9Q9NV88 658 aaKnown RBP21.21■□□□□ 0.99
HDAC4-201ENST00000345617 MYO5CQ9NQX4 1742 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 SYF2O95926 243 aaKnown RBP21.21■□□□□ 0.99
HDAC4-201ENST00000345617 KPNA2P52292 529 aaKnown RBP21.21■□□□□ 0.99
HDAC4-201ENST00000345617 MCF2L2Q86YR7 1114 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 FLT4P35916 1363 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 TRPC6Q9Y210 931 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 DTNBP1Q96EV8 351 aa21.21■□□□□ 0.99
HDAC4-201ENST00000345617 ABCD1P33897 745 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 NXNQ6DKJ4 435 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 NONOQ15233 471 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■■■□ 22.3
HDAC4-201ENST00000345617 FNBP4Q8N3X1 1017 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 SCHIP1Q9P0W5 487 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 E9PMD0 336 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 LDHBP07195 334 aaKnown RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 TRIM56Q9BRZ2 755 aaKnown RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 LMBRD1Q9NUN5 540 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 KCNK3O14649 394 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 CUL1Q13616 776 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 HGSO14964 777 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 GCNT3O95395 438 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 ZNF449Q6P9G9 518 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 TM6SF1Q9BZW5 370 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 PACSIN2Q9UNF0 486 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-201ENST00000345617 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 H7C1D1 291 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 RRAGAQ7L523 313 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
HDAC4-201ENST00000345617 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 SLC27A2O14975 620 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 KCNA4P22459 653 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 TMED1Q13445 227 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 MRRFQ96E11 262 aaKnown RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 MRPL40Q9NQ50 206 aaKnown RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 SETDB2Q96T68 719 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 TRPM2O94759 1503 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 KRT81Q14533 505 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 ARHGEF10LQ9HCE6 1279 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 A0A1B0GW55 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L2P0CJ85 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L3P0CJ86 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L4P0CJ87 422 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L5P0CJ88 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L6P0CJ89 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4L7P0CJ90 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 CCT5P48643 541 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 ZNF174Q15697 407 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 TRIM6Q9C030 488 aaPredicted RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 DUX4Q9UBX2 424 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 EEF1DP29692 281 aaKnown RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 ZNF215Q9UL58 517 aaPredicted RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 MMS22LQ6ZRQ5 1243 aa21.19■□□□□ 0.98
HDAC4-201ENST00000345617 PRPF6O94906 941 aaKnown RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 NOP14P78316 857 aaKnown RBP21.19■□□□□ 0.98
HDAC4-201ENST00000345617 BRDTQ58F21 947 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-201ENST00000345617 REXO1Q8N1G1 1221 aaKnown RBP21.18■□□□□ 0.98
HDAC4-201ENST00000345617 JPH2Q9BR39 696 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-201ENST00000345617 DCTN3O75935 186 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 RFC4P35249 363 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 ZNF710Q8N1W2 664 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 MYCNP04198 464 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-201ENST00000345617 HSPA6P17066 643 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 MORC3Q14149 939 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 MAGEA9P43362 315 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 GALNT17Q6IS24 598 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 PSMD7P51665 324 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 PPP2R5DQ14738 602 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 DENND2AQ9ULE3 1009 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 MAD1L1Q9Y6D9 718 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 RGS12O14924 1447 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 MORC4Q8TE76 937 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms