RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MAP2K5Q13163 448 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 SHCBP1Q8NEM2 672 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 MKL1Q969V6 931 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
ATG4B-201ENST00000344376 PPP1R9AQ9ULJ8 1098 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.06■□□□□ 0.64
ATG4B-201ENST00000344376 PTPREP23469 700 aa19.05■□□□□ 0.64
ATG4B-201ENST00000344376 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
ATG4B-201ENST00000344376 U2AF1L4Q8WU68 220 aaKnown RBP19.05■□□□□ 0.64
ATG4B-201ENST00000344376 TRIB2Q92519 343 aa19.05■□□□□ 0.64
ATG4B-201ENST00000344376 USP6NLQ92738 828 aa19.05■□□□□ 0.64
ATG4B-201ENST00000344376 TOMM22Q9NS69 142 aa19.05■□□□□ 0.64
ATG4B-201ENST00000344376 RANBP6O60518 1105 aaKnown RBP19.04■□□□□ 0.64
ATG4B-201ENST00000344376 PDE4AP27815 886 aa19.04■□□□□ 0.64
ATG4B-201ENST00000344376 GMCL1P1Q8NEA9 526 aa19.04■□□□□ 0.64
ATG4B-201ENST00000344376 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.648e-7■■□□□ 13.8
ATG4B-201ENST00000344376 MROH8Q9H579 483 aa19.04■□□□□ 0.64
ATG4B-201ENST00000344376 HMX1Q9NP08 348 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-201ENST00000344376 PAK6Q9NQU5 681 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-201ENST00000344376 FBXO28Q9NVF7 368 aa19.04■□□□□ 0.64
ATG4B-201ENST00000344376 A0A0G2JMZ2 1700 aa19.04■□□□□ 0.64
ATG4B-201ENST00000344376 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 STRNO43815 780 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 ORC4O43929 436 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 SGPL1O95470 568 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 SLC25A27O95847 323 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 ERCC3P19447 782 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 GRB14Q14449 540 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 TTC22Q5TAA0 569 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 NCAPG2Q86XI2 1143 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 LRRC47Q8N1G4 583 aaKnown RBP19.03■□□□□ 0.64
ATG4B-201ENST00000344376 SHISA4Q96DD7 197 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 DEFB118Q96PH6 123 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 NUP88Q99567 741 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-201ENST00000344376 SLF1Q9BQI6 1058 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 RPTORQ8N122 1335 aa19.03■□□□□ 0.64
ATG4B-201ENST00000344376 TNRC18O15417 2968 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-201ENST00000344376 COPB2P35606 906 aa19.02■□□□□ 0.64
ATG4B-201ENST00000344376 ADAMTS5Q9UNA0 930 aa19.02■□□□□ 0.64
ATG4B-201ENST00000344376 STX8Q9UNK0 236 aa19.02■□□□□ 0.64
ATG4B-201ENST00000344376 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-201ENST00000344376 PLXNB2O15031 1838 aa19.02■□□□□ 0.64
ATG4B-201ENST00000344376 VWA5AO00534 786 aa19.02■□□□□ 0.63
ATG4B-201ENST00000344376 TFRCP02786 760 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 PCP11498 1178 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 PRKAR2AP13861 404 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 TMEM132BQ14DG7 1078 aa19.02■□□□□ 0.63
ATG4B-201ENST00000344376 RRP12Q5JTH9 1297 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 PRPF38BQ5VTL8 546 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 SLFN13Q68D06 897 aa19.02■□□□□ 0.63
ATG4B-201ENST00000344376 RNF41Q9H4P4 317 aaPredicted RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 SLC5A4Q9NY91 659 aa19.02■□□□□ 0.63
ATG4B-201ENST00000344376 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.63
ATG4B-201ENST00000344376 HOXC6P09630 235 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 FGRP09769 529 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 HAND2P61296 217 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 TRIM32Q13049 653 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 MFSD14CQ5VZR4 134 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 DPP9Q86TI2 863 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 PRPF38AQ8NAV1 312 aaKnown RBP19.01■□□□□ 0.63
ATG4B-201ENST00000344376 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 FEM1BQ9UK73 627 aa19.01■□□□□ 0.63
ATG4B-201ENST00000344376 RLFQ13129 1914 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
ATG4B-201ENST00000344376 BMP3P12645 472 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 ADORA2AP29274 412 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 STAT3P40763 770 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 CCL14Q16627 93 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 MAP3K21Q5TCX8 1036 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 ABRAQ8N0Z2 381 aa19■□□□□ 0.63
ATG4B-201ENST00000344376 BRCA2P51587 3418 aa18.99■□□□□ 0.63
ATG4B-201ENST00000344376 ZNF213O14771 459 aa18.99■□□□□ 0.63
ATG4B-201ENST00000344376 ZBED4O75132 1171 aa18.99■□□□□ 0.63
ATG4B-201ENST00000344376 FCER1AP12319 257 aa18.99■□□□□ 0.63
ATG4B-201ENST00000344376 GSPT1P15170 499 aaKnown RBP18.99■□□□□ 0.63
ATG4B-201ENST00000344376 AKNAD1Q5T1N1 836 aa18.99■□□□□ 0.63
ATG4B-201ENST00000344376 SLC1A4P43007 532 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-201ENST00000344376 STAG1Q8WVM7 1258 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 GMCL1Q96IK5 515 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 DSCC1Q9BVC3 393 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 TEX13BQ9BXU2 312 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 IL17RBQ9NRM6 502 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 CTNNA3Q9UI47 895 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 PDE4DIPQ5VU43 2346 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 RAD50Q92878 1312 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 NMT2O60551 498 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 NT5C2P49902 561 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 IKQ13123 557 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-201ENST00000344376 REPS2Q8NFH8 660 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 RUFY2Q8WXA3 655 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 MMP19Q99542 508 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 CRISPLD2Q9H0B8 497 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 ZNF214Q9UL59 606 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-201ENST00000344376 TACC3Q9Y6A5 838 aa18.98■□□□□ 0.63
ATG4B-201ENST00000344376 PARP14Q460N5 1801 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms