RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
FGD6-201ENST00000343958 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
FGD6-201ENST00000343958 TCP10L2B9ZVM9 353 aa9.64□□□□□ -0.87
FGD6-201ENST00000343958 SIK1P57059 783 aa9.64□□□□□ -0.87
FGD6-201ENST00000343958 MFSD14BQ5SR56 506 aa9.64□□□□□ -0.87
FGD6-201ENST00000343958 REXO1Q8N1G1 1221 aaKnown RBP9.64□□□□□ -0.87
FGD6-201ENST00000343958 MTRF1LQ9UGC7 380 aaKnown RBP9.64□□□□□ -0.87
FGD6-201ENST00000343958 GTF2A1P52655 376 aaPredicted RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 CYB5R4Q7L1T6 521 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 NLRP10Q86W26 655 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 KIAA1524Q8TCG1 905 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 FNBP1Q96RU3 617 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 USP21Q9UK80 565 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 TTC31Q49AM3 519 aaPredicted RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 MRPL44Q9H9J2 332 aaKnown RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 ENC1O14682 589 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 CYP27B1O15528 508 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 PRR16Q569H4 304 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 NSMFQ6X4W1 530 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.87
FGD6-201ENST00000343958 NEK8Q86SG6 692 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 DAAM2Q86T65 1068 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 SLC35F6Q8N357 371 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 PIGBQ92521 554 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 LZTS2Q9BRK4 669 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 HEG1Q9ULI3 1381 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 GOLGA6CA6NDK9 693 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 B4DLN1 442 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 CHGBP05060 677 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 GOLGA6DP0CG33 693 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 CCDC51Q96ER9 411 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 GOLGA6AQ9NYA3 693 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 MTUS1Q9ULD2 1270 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 HGSO14964 777 aaPredicted RBP9.63□□□□□ -0.87
FGD6-201ENST00000343958 CALCOCO2Q13137 446 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 MYOCDQ8IZQ8 938 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 TUBB4BP68371 445 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 UBXN2AP68543 259 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 WHAMMP3Q1A5X7 153 aa9.63□□□□□ -0.87
FGD6-201ENST00000343958 VIMP08670 466 aaKnown RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 CYP2J2P51589 502 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 CCDC63Q8NA47 563 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 PIGSQ96S52 555 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 IFIH1Q9BYX4 1025 aaKnown RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 MMP1P03956 469 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 SLC16A2P36021 539 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 GABPB1Q06547 395 aaPredicted RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 PLEKHA8P1O95397 391 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 ATP1A3P13637 1013 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 MXRA7P84157 204 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 RPS6KA1Q15418 735 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 TTC14Q96N46 770 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.62□□□□□ -0.87
FGD6-201ENST00000343958 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 NEDD4P46934 1319 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 UAP1Q16222 522 aaPredicted RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 ACRBPQ8NEB7 543 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 PSMD1Q99460 953 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 ZNF804BA4D1E1 1349 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 ABCC3O15438 1527 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 SRP68Q9UHB9 627 aaKnown RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
FGD6-201ENST00000343958 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 FBF1Q8TES7 1133 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 PSTPIP2Q9H939 334 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.62□□□□□ -0.87
FGD6-201ENST00000343958 PCDHA4Q9UN74 947 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 SAR1BQ9Y6B6 198 aa9.62□□□□□ -0.87
FGD6-201ENST00000343958 GOLGA6BA6NDN3 693 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 IFT20Q8IY31 132 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 ARFGAP2Q8N6H7 521 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 TRIML1Q8N9V2 468 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 CARD10Q9BWT7 1032 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 THRAP3Q9Y2W1 955 aaKnown RBP9.61□□□□□ -0.87
FGD6-201ENST00000343958 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 TUBBP07437 444 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 CASP1P29466 404 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 MCAMP43121 646 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 CEP57Q86XR8 500 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 ZNF354CQ86Y25 554 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 UHMK1Q8TAS1 419 aaKnown RBP9.61□□□□□ -0.87
FGD6-201ENST00000343958 COA7Q96BR5 231 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 EPSTI1Q96J88 318 aa9.61□□□□□ -0.87
FGD6-201ENST00000343958 MPHOSPH6Q99547 160 aaKnown RBP9.61□□□□□ -0.87
FGD6-201ENST00000343958 STMN4Q9H169 189 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms