RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 USP17L2Q6R6M4 530 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 PIK3AP1Q6ZUJ8 805 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 HEATR3Q7Z4Q2 680 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 CPVLQ9H3G5 476 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 SRPRBQ9Y5M8 271 aaKnown RBP21.28■■□□□ 1
HOXA9-201ENST00000343483 BAZ2BQ9UIF8 2168 aaKnown RBP21.28■■□□□ 1
HOXA9-201ENST00000343483 PPIP5K2O43314 1243 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 EIF6P56537 245 aaKnown RBP21.28■■□□□ 1
HOXA9-201ENST00000343483 PLA2G4DQ86XP0 818 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 CEP57L1Q8IYX8 460 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 SUPT20HQ8NEM7 779 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 KCNF1Q9H3M0 494 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 SH3GLB2Q9NR46 395 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 MTMR4Q9NYA4 1195 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 FAM13BQ9NYF5 915 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 SWAP70Q9UH65 585 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 PLIN4Q96Q06 1357 aa21.28■■□□□ 1
HOXA9-201ENST00000343483 BIN1O00499 593 aa21.27■■□□□ 1
HOXA9-201ENST00000343483 WNT7AO00755 349 aa21.27■■□□□ 1
HOXA9-201ENST00000343483 ADAMTS3O15072 1205 aa21.27■■□□□ 1
HOXA9-201ENST00000343483 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
HOXA9-201ENST00000343483 NOLC1Q14978 699 aaKnown RBP eCLIP21.27■■□□□ 1
HOXA9-201ENST00000343483 TTC38Q5R3I4 469 aa21.27■■□□□ 1
HOXA9-201ENST00000343483 DRC7Q8IY82 874 aa21.27■■□□□ 1
HOXA9-201ENST00000343483 TCP10Q12799 353 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 ZNF174Q15697 407 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 LONRF3Q496Y0 759 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 WWC2Q6AWC2 1192 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 CLEC10AQ8IUN9 316 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 ZFPM1Q8IX07 1006 aa21.27■□□□□ 0.99
HOXA9-201ENST00000343483 NAT10Q9H0A0 1025 aaKnown RBP21.27■□□□□ 0.99
HOXA9-201ENST00000343483 NOVP48745 357 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 TYW1BQ6NUM6 668 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.26■□□□□ 0.99
HOXA9-201ENST00000343483 BLIDQ8IZY5 108 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 ZNF579Q8NAF0 562 aaKnown RBP21.26■□□□□ 0.99
HOXA9-201ENST00000343483 CNNM3Q8NE01 707 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 CSRNP2Q9H175 543 aa21.26■□□□□ 0.99
HOXA9-201ENST00000343483 USP17L5A8MUK1 530 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 BECN2A8MW95 431 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 SHMT1P34896 483 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 HDLBPQ00341 1268 aaKnown RBP21.25■□□□□ 0.99
HOXA9-201ENST00000343483 DPCR1Q3MIW9 517 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 LRRC47Q8N1G4 583 aaKnown RBP21.25■□□□□ 0.99
HOXA9-201ENST00000343483 C17orf53Q8N3J3 647 aaPredicted RBP21.25■□□□□ 0.99
HOXA9-201ENST00000343483 TTLL6Q8N841 843 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 SPZ1Q9BXG8 430 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 PCDHA4Q9UN74 947 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 SCN9AQ15858 1988 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 MPHOSPH10O00566 681 aaKnown RBP21.25■□□□□ 0.99
HOXA9-201ENST00000343483 BMP15O95972 392 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 PTGS1P23219 599 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 KRBA2Q6ZNG9 492 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 HOMER1Q86YM7 354 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 BARHL2Q9NY43 387 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 SERPINA10Q9UK55 444 aa21.25■□□□□ 0.99
HOXA9-201ENST00000343483 TGFB2P61812 414 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 PNOCQ13519 176 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 DNTTIP2Q5QJE6 756 aaKnown RBP21.24■□□□□ 0.99
HOXA9-201ENST00000343483 YDJCA8MPS7 323 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 STXBP3O00186 592 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 POLR2DO15514 142 aaKnown RBP21.24■□□□□ 0.99
HOXA9-201ENST00000343483 SLURP2P0DP57 97 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 ZSCAN29Q8IWY8 852 aaPredicted RBP21.24■□□□□ 0.99
HOXA9-201ENST00000343483 DHX40Q8IX18 779 aaKnown RBP21.24■□□□□ 0.99
HOXA9-201ENST00000343483 RASGRP4Q8TDF6 673 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 VAT1LQ9HCJ6 419 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 CLIP2Q9UDT6 1046 aa21.24■□□□□ 0.99
HOXA9-201ENST00000343483 FRMPD2Q68DX3 1309 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-201ENST00000343483 MYO3BQ8WXR4 1341 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 IGKV6D-41A0A0C4DH26 115 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 TTLL1O95922 423 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 PDHBP11177 359 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 TRAPPC10P48553 1259 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 GPR162Q16538 588 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 CCDC93Q567U6 631 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 SARM1Q6SZW1 724 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 METTL16Q86W50 562 aaKnown RBP21.23■□□□□ 0.99
HOXA9-201ENST00000343483 AOPEPQ8N6M6 819 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 RRP36Q96EU6 259 aaKnown RBP21.23■□□□□ 0.99
HOXA9-201ENST00000343483 SPTLC3Q9NUV7 552 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
HOXA9-201ENST00000343483 PYCARDQ9ULZ3 195 aa21.23■□□□□ 0.99
HOXA9-201ENST00000343483 BRCA1P38398 1863 aaKnown RBP21.23■□□□□ 0.99
HOXA9-201ENST00000343483 MCM7P33993 719 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 NLRP12P59046 1061 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 PTGDRQ13258 359 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 ISM2Q6H9L7 571 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 USP49Q70CQ1 688 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 CCDC186Q7Z3E2 898 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 PDILTQ8N807 584 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 KIAA1524Q8TCG1 905 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 FERMT2Q96AC1 680 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 EHD4Q9H223 541 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 FAM198AQ9UFP1 575 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 MORC2Q9Y6X9 1032 aaPredicted RBP21.22■□□□□ 0.99
HOXA9-201ENST00000343483 IDI2Q9BXS1 227 aa21.22■□□□□ 0.99
HOXA9-201ENST00000343483 UBA5Q9GZZ9 404 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms