RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ABHD8Q96I13 439 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ANO2Q9NQ90 1003 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ZSWIM5Q9P217 1185 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PPP1R9AQ9ULJ8 1098 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TNPO2O14787 897 aaKnown RBP15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FDX1P10109 184 aa15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 COA7Q96BR5 231 aa15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TMEM47Q9BQJ4 181 aa15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 MTA3Q9BTC8 594 aa15.4■□□□□ 0.06
HLA-DQA1-201ENST00000343139 B4E1Z4 1266 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 E7EWF7 191 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 BMP3P12645 472 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLC1A4P43007 532 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 IRF5Q13568 498 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 Q3C1V9 767 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SHCBP1Q8NEM2 672 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 DCAF4Q8WV16 495 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 BTBD7Q9P203 1132 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
HLA-DQA1-201ENST00000343139 VWA5AO00534 786 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ATP2A1O14983 1001 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RNF20Q5VTR2 975 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 FAM160B2Q86V87 743 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 NKX2-3Q8TAU0 364 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ATG4CQ96DT6 458 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PAGR1Q9BTK6 254 aa15.38■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RAD21O60216 631 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 COPB2P35606 906 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 STAT2P52630 851 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TSGA10IPQ3SY00 556 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SPATC1LQ9H0A9 340 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLC27A2O14975 620 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 REC8O95072 547 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLC25A27O95847 323 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 MCCP23508 829 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 OAZ1P54368 228 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PRKCZQ05513 592 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ENAHQ8N8S7 591 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ARMC5Q96C12 935 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PORCNQ9H237 461 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TNKSO95271 1327 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 FLT3LGP49771 235 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TMEM132BQ14DG7 1078 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 BTNL9Q6UXG8 535 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 GPR142Q7Z601 462 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PLEKHH3Q7Z736 793 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 NBPF11Q86T75 865 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 MOV10L1Q9BXT6 1211 aaKnown RBP15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 MROH8Q9H579 483 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLC38A10Q9HBR0 1119 aa15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQA1-201ENST00000343139 HTTP42858 3142 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RLFQ13129 1914 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TMEM232C9JQI7 657 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 STRNO43815 780 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PDHBP11177 359 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SEC23AQ15436 765 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 GPATCH4Q5T3I0 446 aaKnown RBP15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RIOX2Q8IUF8 465 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ABRAQ8N0Z2 381 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 RAET1EQ8TD07 263 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 USP6NLQ92738 828 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 KCNB2Q92953 911 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZKSCAN3Q9BRR0 538 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TAF6LQ9Y6J9 622 aa15.35■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PEX10O60683 326 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZBED4O75132 1171 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 SLC9C1Q4G0N8 1177 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 MORN1Q5T089 497 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PNMA1Q8ND90 353 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 GABRQQ9UN88 632 aa15.34■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ERICH2A1L162 156 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms