RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
FOXM1-201ENST00000342628 PFKFB2O60825 505 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 BMP3P12645 472 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 HMGCS2P54868 508 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 TROAPQ12815 778 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 ME3Q16798 604 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 GADL1Q6ZQY3 521 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 FASTKD5Q7L8L6 764 aaKnown RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 SPICE1Q8N0Z3 855 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 LZTS2Q9BRK4 669 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 IRF6O14896 467 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 WDR46O15213 610 aaKnown RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 NDUFB10O96000 172 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 ZBTB48P10074 688 aaPredicted RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 GTF2A2P52657 109 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.888e-7■■■□□ 17.4
FOXM1-201ENST00000342628 GRM4Q14833 912 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CNKSR2Q8WXI2 1034 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 PDHBP11177 359 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CCDC83Q8IWF9 413 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CHURC1Q8WUH1 139 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
FOXM1-201ENST00000342628 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.54□□□□□ -0.88
FOXM1-201ENST00000342628 CETPP11597 493 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
FOXM1-201ENST00000342628 SPRYD7Q5W111 196 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 PIAS4Q8N2W9 510 aaPredicted RBP9.53□□□□□ -0.88
FOXM1-201ENST00000342628 NECAB1Q8N987 351 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 GTF3C6Q969F1 213 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 FRMPD2Q68DX3 1309 aaPredicted RBP9.53□□□□□ -0.88
FOXM1-201ENST00000342628 KLRF2D3W0D1 207 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 ZNF543Q08ER8 600 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 GRM1Q13255 1194 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 SH3D19Q5HYK7 790 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
FOXM1-201ENST00000342628 HHIPL1Q96JK4 782 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 KCNH4Q9UQ05 1017 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
FOXM1-201ENST00000342628 TMEM232C9JQI7 657 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 FAM83BQ5T0W9 1011 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 KCTD1Q719H9 257 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 FAM160B2Q86V87 743 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 PROCA1Q8NCQ7 364 aaPredicted RBP9.52□□□□□ -0.88
FOXM1-201ENST00000342628 C12orf42Q96LP6 360 aa9.52□□□□□ -0.88
FOXM1-201ENST00000342628 NCOA5Q9HCD5 579 aaKnown RBP9.52□□□□□ -0.88
FOXM1-201ENST00000342628 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 SCRN1Q12765 414 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 FEM1BQ9UK73 627 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 CCL15-CCL14A0A0B4J2E2 113 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 A0A0G2JLL6 359 aaPredicted RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 MANSC4A6NHS7 340 aaPredicted RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L15C9J2P7 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L11C9JVI0 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L18D6R9N7 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L22D6RA61 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L19D6RCP7 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L20D6RJB6 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 LARGE1O95461 756 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 SNHG28P0DPA3 235 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 VCAM1P19320 739 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 STAT2P52630 851 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 SSRP1Q08945 709 aaKnown RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 CCL15Q16663 113 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 PRRT2Q7Z6L0 340 aaPredicted RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 LLPHQ9BRT6 129 aaKnown RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 RPAP3Q9H6T3 665 aaPredicted RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
FOXM1-201ENST00000342628 HPS5Q9UPZ3 1129 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
FOXM1-201ENST00000342628 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
FOXM1-201ENST00000342628 OSBPP22059 807 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 RASAL3Q86YV0 1011 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 FAM184AQ8NB25 1140 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 FLOT1O75955 427 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 SMARCA1P28370 1054 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 IRX3P78415 501 aaPredicted RBP9.51□□□□□ -0.89
FOXM1-201ENST00000342628 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
FOXM1-201ENST00000342628 OTUD7BQ6GQQ9 843 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 TMTC3Q6ZXV5 915 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 UBA5Q9GZZ9 404 aa9.51□□□□□ -0.89
FOXM1-201ENST00000342628 SEC63Q9UGP8 760 aaKnown RBP9.51□□□□□ -0.89
FOXM1-201ENST00000342628 SLC10A3P09131 477 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms