RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 PCP11498 1178 aaKnown RBP21.51■■□□□ 1.03
CDK13-202ENST00000340829 MCAMP43121 646 aa21.51■■□□□ 1.03
CDK13-202ENST00000340829 SPATA1Q5VX52 437 aa21.51■■□□□ 1.03
CDK13-202ENST00000340829 NT5C3AQ9H0P0 336 aa21.51■■□□□ 1.03
CDK13-202ENST00000340829 APBA3O96018 575 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 PPP1R7Q15435 360 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 PTPN21Q16825 1174 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 NSMFQ6X4W1 530 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 FAM76AQ8TAV0 307 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 ZNF215Q9UL58 517 aaPredicted RBP21.5■■□□□ 1.03
CDK13-202ENST00000340829 SETD1BQ9UPS6 1966 aaKnown RBP21.5■■□□□ 1.03
CDK13-202ENST00000340829 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 CYP2D7A0A087X1C5 515 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 RPN1P04843 607 aaKnown RBP21.5■■□□□ 1.03
CDK13-202ENST00000340829 SUSD4Q5VX71 490 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 UBLCP1Q8WVY7 318 aaPredicted RBP21.5■■□□□ 1.03
CDK13-202ENST00000340829 KIFC2Q96AC6 838 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 CCDC51Q96ER9 411 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 SPOPO43791 374 aa21.5■■□□□ 1.03
CDK13-202ENST00000340829 EXOC3O60645 756 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 ERCC6LQ2NKX8 1250 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 TPH2Q8IWU9 490 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 GRAMD1CQ8IYS0 662 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 IFIH1Q9BYX4 1025 aaKnown RBP21.49■■□□□ 1.03
CDK13-202ENST00000340829 MTUS1Q9ULD2 1270 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 SOS2Q07890 1332 aaPredicted RBP21.49■■□□□ 1.03
CDK13-202ENST00000340829 PPIP5K2O43314 1243 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 GPBP1Q86WP2 473 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 PICK1Q9NRD5 415 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 PCDHA12Q9UN75 941 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 SPATA31A3Q5VYP0 1347 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 SEL1L2Q5TEA6 688 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 SFMBT2Q5VUG0 894 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 DDX12PQ92771 950 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 SYNE4Q8N205 404 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 GIMAP7Q8NHV1 300 aa21.49■■□□□ 1.03
CDK13-202ENST00000340829 MTRF1LQ9UGC7 380 aaKnown RBP21.49■■□□□ 1.03
CDK13-202ENST00000340829 FAM170AA1A519 330 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 SEMA3EO15041 775 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 ETF1P62495 437 aaKnown RBP21.48■■□□□ 1.03
CDK13-202ENST00000340829 PRR16Q569H4 304 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 KIF4AO95239 1232 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 MMP1P03956 469 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 NF2P35240 595 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 GOLGA8FQ08AF8 430 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 GOLGA8DPQ0D2H9 430 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 CCDC26Q8TAB7 109 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 SLC39A2Q9NP94 309 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 GJB4Q9NTQ9 266 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 XDHP47989 1333 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 SNAP23O00161 211 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 IFNAR1P17181 557 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 CALCOCO2Q13137 446 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 WDR44Q5JSH3 913 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 CCDC114Q96M63 670 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 FERMT1Q9BQL6 677 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 CLEC11AQ9Y240 323 aa21.48■■□□□ 1.03
CDK13-202ENST00000340829 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
CDK13-202ENST00000340829 SMYD4Q8IYR2 804 aaPredicted RBP21.47■■□□□ 1.03
CDK13-202ENST00000340829 MYOCDQ8IZQ8 938 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 PCDHB13Q9Y5F0 798 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 STK24Q9Y6E0 443 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 GALNT17Q6IS24 598 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 CEP83Q9Y592 693 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 H7C1D1 291 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 EBAG9O00559 213 aa21.47■■□□□ 1.03
CDK13-202ENST00000340829 CACTINQ8WUQ7 758 aaKnown RBP21.47■■□□□ 1.03
CDK13-202ENST00000340829 ATP2A1O14983 1001 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 CEP104O60308 925 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 ARFGAP2Q8N6H7 521 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 RDH13Q8NBN7 331 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 PDE6BP35913 854 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 PPRC1Q5VV67 1664 aaKnown RBP21.46■■□□□ 1.03
CDK13-202ENST00000340829 ZNF335Q9H4Z2 1342 aaPredicted RBP21.46■■□□□ 1.03
CDK13-202ENST00000340829 KDM3AQ9Y4C1 1321 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 DNM2P50570 870 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 TRIM31Q9BZY9 425 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 NSRP1Q9H0G5 558 aaKnown RBP21.46■■□□□ 1.03
CDK13-202ENST00000340829 STMN4Q9H169 189 aaPredicted RBP21.46■■□□□ 1.03
CDK13-202ENST00000340829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.46■■□□□ 1.038e-9■■■■■ 54.8
CDK13-202ENST00000340829 KLHL7Q8IXQ5 586 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 SUPT20HQ8NEM7 779 aa21.46■■□□□ 1.03
CDK13-202ENST00000340829 LSM14BQ9BX40 385 aaKnown RBP21.46■■□□□ 1.03
CDK13-202ENST00000340829 CERKLQ49MI3 558 aaPredicted RBP21.45■■□□□ 1.02
CDK13-202ENST00000340829 KIFAP3Q92845 792 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 KIF2CQ99661 725 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 LEMD3Q9Y2U8 911 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 PPP1R14CQ8TAE6 165 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 GAS7O60861 476 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 IFT74Q96LB3 600 aa21.45■■□□□ 1.02
CDK13-202ENST00000340829 STRBPQ96SI9 672 aaKnown RBP21.45■■□□□ 1.02
CDK13-202ENST00000340829 INCENPQ9NQS7 918 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms