RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 FBXO28Q9NVF7 368 aa16.66■□□□□ 0.26
UPK3BL1-201ENST00000340457 RAD21O60216 631 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 IFIT2P09913 472 aaKnown RBP16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 FCER1AP12319 257 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 VCPKMTQ9H867 229 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 COL11A1P12107 1806 aaPredicted RBP16.65■□□□□ 0.26
UPK3BL1-201ENST00000340457 PGK1P00558 417 aa16.64■□□□□ 0.25
UPK3BL1-201ENST00000340457 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.25
UPK3BL1-201ENST00000340457 CDK8P49336 464 aa16.64■□□□□ 0.25
UPK3BL1-201ENST00000340457 TLE2Q04725 743 aa16.64■□□□□ 0.25
UPK3BL1-201ENST00000340457 LENG1Q96BZ8 264 aaPredicted RBP16.64■□□□□ 0.25
UPK3BL1-201ENST00000340457 PARP14Q460N5 1801 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 TTC28Q96AY4 2481 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 USP17L21D6R901 530 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 ITGB8P26012 769 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 SNX17Q15036 470 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 MMP19Q99542 508 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 XPNPEP3Q9NQH7 507 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
UPK3BL1-201ENST00000340457 WDR46O15213 610 aaKnown RBP16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 ADD2P35612 726 aa16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 SIRT2Q8IXJ6 389 aa16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
UPK3BL1-201ENST00000340457 RARBP10826 455 aa16.61■□□□□ 0.25
UPK3BL1-201ENST00000340457 EPHB4P54760 987 aa16.61■□□□□ 0.25
UPK3BL1-201ENST00000340457 STK11IPQ8N1F8 1099 aa16.61■□□□□ 0.25
UPK3BL1-201ENST00000340457 MAFAQ8NHW3 353 aaPredicted RBP16.61■□□□□ 0.25
UPK3BL1-201ENST00000340457 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
UPK3BL1-201ENST00000340457 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 VWA5AO00534 786 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 PQBP1O60828 265 aaKnown RBP16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 SLC25A27O95847 323 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 STAT3P40763 770 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 KCTD2Q14681 263 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 C16orf86Q6ZW13 317 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 ADAMTS5Q9UNA0 930 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 SPTBN5Q9NRC6 3674 aaKnown RBP16.6■□□□□ 0.25
UPK3BL1-201ENST00000340457 SLC4A3P48751 1232 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 RIOX2Q8IUF8 465 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
UPK3BL1-201ENST00000340457 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 CLTBP09497 229 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 ZNF865P0CJ78 1059 aaPredicted RBP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 ATP5JP18859 108 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 SMAD3P84022 425 aaKnown RBP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 C1orf53Q5VUE5 145 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 RNF180Q86T96 592 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 ZNF214Q9UL59 606 aaPredicted RBP16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 TACC3Q9Y6A5 838 aa16.58■□□□□ 0.24
UPK3BL1-201ENST00000340457 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 HMMRO75330 724 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 RAG1P15918 1043 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 RPAP2Q8IXW5 612 aaPredicted RBP16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 REPS2Q8NFH8 660 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 HAUS7Q99871 368 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
UPK3BL1-201ENST00000340457 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 AKR1A1P14550 325 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 FOSL2P15408 326 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 TMEM39AQ9NV64 488 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 CNPY2Q9Y2B0 182 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 RIPK3Q9Y572 518 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 MYH7P12883 1935 aa16.56■□□□□ 0.24
UPK3BL1-201ENST00000340457 KIAA0355O15063 1070 aa16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms