RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NECTIN1Q15223 517 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 Q3C1V9 767 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 IQCA1Q86XH1 822 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 TTC14Q96N46 770 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 TMEM47Q9BQJ4 181 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
UBE3B-201ENST00000340074 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
UBE3B-201ENST00000340074 SLC27A2O14975 620 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 GNRH1P01148 92 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 TOP1P11387 765 aaKnown RBP17.96■□□□□ 0.47
UBE3B-201ENST00000340074 TRDNQ13061 729 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 FBXO46Q6PJ61 603 aaPredicted RBP17.96■□□□□ 0.47
UBE3B-201ENST00000340074 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 ATG4CQ96DT6 458 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 BTBD7Q9P203 1132 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 PTPN22Q9Y2R2 807 aa17.96■□□□□ 0.47
UBE3B-201ENST00000340074 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 MCCP23508 829 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 RASGRP2Q7LDG7 609 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 GMCL1Q96IK5 515 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
UBE3B-201ENST00000340074 PPP1R9AQ9ULJ8 1098 aa17.95■□□□□ 0.46
UBE3B-201ENST00000340074 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
UBE3B-201ENST00000340074 BMP3P12645 472 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
UBE3B-201ENST00000340074 ENAHQ8N8S7 591 aaPredicted RBP17.94■□□□□ 0.46
UBE3B-201ENST00000340074 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 SLF1Q9BQI6 1058 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 PORCNQ9H237 461 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
UBE3B-201ENST00000340074 TNKSO95271 1327 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 HOXD10P28358 340 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 SLC1A4P43007 532 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 KCTD1Q719H9 257 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 DGKHQ86XP1 1220 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 MB21D1Q8N884 522 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 SRRDQ9UH36 339 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
UBE3B-201ENST00000340074 MYH6P13533 1939 aa17.93■□□□□ 0.46
UBE3B-201ENST00000340074 BRCA2P51587 3418 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 VWA5AO00534 786 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 PRKCZQ05513 592 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 CCAR1Q8IX12 1150 aaKnown RBP17.92■□□□□ 0.46
UBE3B-201ENST00000340074 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
UBE3B-201ENST00000340074 ANKS1AQ92625 1134 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 COA7Q96BR5 231 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 GABRQQ9UN88 632 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 HPS5Q9UPZ3 1129 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 SMCHD1A6NHR9 2005 aa17.92■□□□□ 0.46
UBE3B-201ENST00000340074 TMEM232C9JQI7 657 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 PRMT2P55345 433 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 CCNA1P78396 465 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 PLS1Q14651 629 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 TMEM132BQ14DG7 1078 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 RNF20Q5VTR2 975 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 MB21D2Q8IYB1 491 aaPredicted RBP17.91■□□□□ 0.46
UBE3B-201ENST00000340074 DCAF4Q8WV16 495 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 KIFC2Q96AC6 838 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 SPATC1LQ9H0A9 340 aa17.91■□□□□ 0.46
UBE3B-201ENST00000340074 REC8O95072 547 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 PDHBP11177 359 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 MAPK4P31152 587 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 STAT2P52630 851 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 SEC23AQ15436 765 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 CCDC96Q2M329 555 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 PNMA1Q8ND90 353 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 MOV10L1Q9BXT6 1211 aaKnown RBP17.9■□□□□ 0.46
UBE3B-201ENST00000340074 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
UBE3B-201ENST00000340074 FLT3LGP49771 235 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 ANTXR2P58335 489 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.46
UBE3B-201ENST00000340074 IFIT1BQ5T764 474 aaKnown RBP17.89■□□□□ 0.46
UBE3B-201ENST00000340074 GPR142Q7Z601 462 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 RASEFQ8IZ41 740 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 REPS2Q8NFH8 660 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 RAET1EQ8TD07 263 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 CHURC1Q8WUH1 139 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 PLXNA1Q9UIW2 1896 aa17.89■□□□□ 0.46
UBE3B-201ENST00000340074 FRMPD2Q68DX3 1309 aaPredicted RBP17.89■□□□□ 0.45
UBE3B-201ENST00000340074 IFIT3O14879 490 aaKnown RBP17.89■□□□□ 0.45
UBE3B-201ENST00000340074 PLA2G6O60733 806 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 SNHG28P0DPA3 235 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 COL9A3Q14050 684 aaPredicted RBP17.89■□□□□ 0.45
UBE3B-201ENST00000340074 WDR78Q5VTH9 848 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 TTBK2Q6IQ55 1244 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
UBE3B-201ENST00000340074 GJD2Q9UKL4 321 aa17.89■□□□□ 0.45
UBE3B-201ENST00000340074 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms