RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 NPHP1O15259 732 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 ONECUT3O60422 494 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 IGSF3O75054 1194 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 MYH6P13533 1939 aa17.09■□□□□ 0.33
TNFSF13-201ENST00000338784 IRS2Q9Y4H2 1338 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 TEX33O43247 280 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 USP5P45974 858 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 ARL6IP4Q66PJ3 421 aaKnown RBP17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 PANX2Q96RD6 677 aa17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.33
TNFSF13-201ENST00000338784 XDHP47989 1333 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 FANCGO15287 622 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 URI1O94763 535 aaPredicted RBP17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 IL17AQ16552 155 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 PNMA1Q8ND90 353 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 LRRN4CLQ8ND94 238 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 STAMQ92783 540 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 MKRN1Q9UHC7 482 aaKnown RBP17.08■□□□□ 0.32
TNFSF13-201ENST00000338784 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 IGSF22Q8N9C0 903 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 ANKS1AQ92625 1134 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
TNFSF13-201ENST00000338784 LY75O60449 1722 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 PBX1P40424 430 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GNAQP50148 359 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GNG11P61952 73 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 DMTNQ08495 405 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 AMOTL1Q8IY63 956 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 MNS1Q8NEH6 495 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 BAG3O95817 575 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 H2AFXP16104 143 aaPredicted RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 CASQ1P31415 396 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 TXLNAP40222 546 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GSTO1P78417 241 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 RBL2Q08999 1139 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 UTP14CQ5TAP6 766 aaKnown RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 UBXN4Q92575 508 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GPKOWQ92917 476 aaPredicted RBP eCLIP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 CASZ1Q86V15 1759 aa17.06■□□□□ 0.32
TNFSF13-201ENST00000338784 GRM4Q14833 912 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 STAG2Q8N3U4 1231 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 DYNLL2Q96FJ2 89 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 MTRQ99707 1265 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
TNFSF13-201ENST00000338784 CCDC175P0C221 793 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 MAD2L2Q9UI95 211 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 ROBO3Q96MS0 1386 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 LAMB1P07942 1786 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 GRAPQ13588 217 aa17.04■□□□□ 0.32
TNFSF13-201ENST00000338784 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms