RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 OSBPL5Q9H0X9 879 aaPredicted RBP18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 PCDHA5Q9Y5H7 936 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 PLIN4Q96Q06 1357 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 STXBP3O00186 592 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 ACTN4O43707 911 aaKnown RBP18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 GNAQP50148 359 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 PTGDRQ13258 359 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 DACT2Q5SW24 774 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 HHIPL2Q6UWX4 724 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 BLIDQ8IZY5 108 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 C7orf43Q8WVR3 580 aa18.59■□□□□ 0.57
SCNN1A-202ENST00000338748 USP17L5A8MUK1 530 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 M0R2N6 131 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 TOP1P11387 765 aaKnown RBP18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 AOC3Q16853 763 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 CCDC144BQ3MJ40 725 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 LRRC47Q8N1G4 583 aaKnown RBP18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 BPIFA3Q9BQP9 254 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 PYCARDQ9ULZ3 195 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 PCDHA4Q9UN74 947 aa18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 MORC2Q9Y6X9 1032 aaPredicted RBP18.58■□□□□ 0.57
SCNN1A-202ENST00000338748 ATP2C1P98194 919 aaPredicted RBP18.58■□□□□ 0.56
SCNN1A-202ENST00000338748 CCDC186Q7Z3E2 898 aa18.58■□□□□ 0.56
SCNN1A-202ENST00000338748 MTMR4Q9NYA4 1195 aa18.58■□□□□ 0.56
SCNN1A-202ENST00000338748 SERPINB13Q9UIV8 391 aa18.58■□□□□ 0.56
SCNN1A-202ENST00000338748 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 MCM7P33993 719 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 SHMT1P34896 483 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 KIAA2012Q0VF49 1180 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 IL17AQ16552 155 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 HOMER1Q86YM7 354 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 DRC7Q8IY82 874 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 HSD3B7Q9H2F3 369 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 SH3GLB2Q9NR46 395 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 CLIP2Q9UDT6 1046 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 SIPA1L1O43166 1804 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 IGKV6D-41A0A0C4DH26 115 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 VWA3AA6NCI4 1184 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 LRMPQ12912 555 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 POSTNQ15063 836 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 SPZ1Q9BXG8 430 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 STK32BQ9NY57 414 aa18.57■□□□□ 0.56
SCNN1A-202ENST00000338748 FAM196BA6NMK8 535 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 OFD1O75665 1012 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 PDHBP11177 359 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 CALML3P27482 149 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 SHROOM1Q2M3G4 852 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 STRIP1Q5VSL9 837 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 ZDHHC15Q96MV8 337 aa18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 FRMPD2Q68DX3 1309 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-202ENST00000338748 TCP10Q12799 353 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 DHX58Q96C10 678 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 PCDHA6Q9UN73 950 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 PCDHA8Q9Y5H6 950 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 FERMT2Q96AC1 680 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 MRFAP1L1Q96HT8 127 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 VAT1LQ9HCJ6 419 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 MAN1B1Q9UKM7 699 aa18.55■□□□□ 0.56
SCNN1A-202ENST00000338748 GOLGA6L6A8MZA4 724 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 CASP1P29466 404 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 CDC25BP30305 580 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 TRAPPC10P48553 1259 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 CNKSR1Q969H4 720 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 PIGSQ96S52 555 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 YDJCA8MPS7 323 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 BMP15O95972 392 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 ATP1A3P13637 1013 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 ARID5BQ14865 1188 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 ELOA2Q8IYF1 753 aaPredicted RBP18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 C4orf32Q8N8J7 132 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 LZTS2Q9BRK4 669 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 FAM198AQ9UFP1 575 aa18.54■□□□□ 0.56
SCNN1A-202ENST00000338748 GREB1LQ9C091 1923 aaPredicted RBP18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 DDTLA6NHG4 134 aaPredicted RBP18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 C21orf2O43822 256 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 LMOD1P29536 600 aaPredicted RBP18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 INF2Q27J81 1249 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 DAGLBQ8NCG7 672 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 SARSP49591 514 aaKnown RBP18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 NAPAP54920 295 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 SH3BP5LQ7L8J4 393 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
SCNN1A-202ENST00000338748 KIAA1524Q8TCG1 905 aa18.52■□□□□ 0.56
SCNN1A-202ENST00000338748 NAP1L5Q96NT1 182 aaPredicted RBP18.52■□□□□ 0.56
SCNN1A-202ENST00000338748 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.56
SCNN1A-202ENST00000338748 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
SCNN1A-202ENST00000338748 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 SNHG28P0DPA3 235 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 CDC25AP30304 524 aa18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 CACTINQ8WUQ7 758 aaKnown RBP18.51■□□□□ 0.55
SCNN1A-202ENST00000338748 TMEM60Q9H2L4 133 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms