RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
CSMD2-202ENST00000338325 MAFAQ8NHW3 353 aaPredicted RBP13.88□□□□□ -0.19
CSMD2-202ENST00000338325 ARMT1Q9H993 441 aa13.88□□□□□ -0.19
CSMD2-202ENST00000338325 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
CSMD2-202ENST00000338325 PHF24Q9UPV7 400 aa13.88□□□□□ -0.19
CSMD2-202ENST00000338325 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
CSMD2-202ENST00000338325 RARBP10826 455 aa13.87□□□□□ -0.19
CSMD2-202ENST00000338325 TLE2Q04725 743 aa13.87□□□□□ -0.19
CSMD2-202ENST00000338325 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
CSMD2-202ENST00000338325 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
CSMD2-202ENST00000338325 MMP19Q99542 508 aa13.87□□□□□ -0.19
CSMD2-202ENST00000338325 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
CSMD2-202ENST00000338325 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
CSMD2-202ENST00000338325 MBD4O95243 580 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 CLTBP09497 229 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 RNF180Q86T96 592 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 TINF2Q9BSI4 451 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 TACC3Q9Y6A5 838 aa13.86□□□□□ -0.19
CSMD2-202ENST00000338325 TMEM265A0A087WTH1 108 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 PRKAB2O43741 272 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 IFIT2P09913 472 aaKnown RBP13.85□□□□□ -0.19
CSMD2-202ENST00000338325 ADD2P35612 726 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 CDK8P49336 464 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 KCTD2Q14681 263 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 C12orf60Q5U649 245 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
CSMD2-202ENST00000338325 FBXO28Q9NVF7 368 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 DIS3Q9Y2L1 958 aaKnown RBP13.85□□□□□ -0.19
CSMD2-202ENST00000338325 CYP2D7A0A087X1C5 515 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
CSMD2-202ENST00000338325 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 APBB1O00213 710 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 PGK1P00558 417 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 PGK2P07205 417 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 EEF2P13639 858 aaKnown RBP13.85□□□□□ -0.19
CSMD2-202ENST00000338325 FOSL2P15408 326 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 ITGB8P26012 769 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 COPB2P35606 906 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
CSMD2-202ENST00000338325 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 MYH4Q9Y623 1939 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 VWA5AO00534 786 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 KIAA0355O15063 1070 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 PQBP1O60828 265 aaKnown RBP13.84□□□□□ -0.19
CSMD2-202ENST00000338325 ZNF865P0CJ78 1059 aaPredicted RBP13.84□□□□□ -0.19
CSMD2-202ENST00000338325 AKR1A1P14550 325 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 RAG1P15918 1043 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
CSMD2-202ENST00000338325 STAT3P40763 770 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSMD2-202ENST00000338325 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
CSMD2-202ENST00000338325 PPP1R9AQ9ULJ8 1098 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 PRUNE2Q8WUY3 3088 aa13.84□□□□□ -0.19
CSMD2-202ENST00000338325 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 USP17L21D6R901 530 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 EPHB4P54760 987 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 FPGSQ05932 587 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 LENG1Q96BZ8 264 aaPredicted RBP13.83□□□□□ -0.2
CSMD2-202ENST00000338325 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 CNPY2Q9Y2B0 182 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 VCANP13611 3396 aa13.83□□□□□ -0.2
CSMD2-202ENST00000338325 ZBED9Q6R2W3 1325 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 ADAMTS4O75173 837 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 HMMRO75330 724 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSMD2-202ENST00000338325 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 RPAP2Q8IXW5 612 aaPredicted RBP13.82□□□□□ -0.2
CSMD2-202ENST00000338325 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
CSMD2-202ENST00000338325 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 BOLA2Q9H3K6 86 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 MCM3APO60318 1980 aa13.82□□□□□ -0.2
CSMD2-202ENST00000338325 SPTBN5Q9NRC6 3674 aaKnown RBP13.82□□□□□ -0.2
CSMD2-202ENST00000338325 SYNRGQ9UMZ2 1314 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 RAD21O60216 631 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 ATP5JP18859 108 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 ANKRD33Q7Z3H0 272 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
CSMD2-202ENST00000338325 TOX2Q96NM4 488 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 STARD7Q9NQZ5 370 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 SLC4A4Q9Y6R1 1079 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
CSMD2-202ENST00000338325 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 ACLYP53396 1101 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
CSMD2-202ENST00000338325 UBE3CQ15386 1083 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms