RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 A0A1W2PRG0 241 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 GLTPD2A6NH11 291 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 F5H6K3 240 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 SLC1A4P43007 532 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 KLRC3Q07444 240 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
CBX3-201ENST00000337620 ASNSP08243 561 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 ECE1P42892 770 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 CEBPZQ03701 1054 aaKnown RBP16.96■□□□□ 0.3
CBX3-201ENST00000337620 GPATCH4Q5T3I0 446 aaKnown RBP16.96■□□□□ 0.3
CBX3-201ENST00000337620 TTBK2Q6IQ55 1244 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.3
CBX3-201ENST00000337620 ACER1Q8TDN7 264 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.3
CBX3-201ENST00000337620 SHISA4Q96DD7 197 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 HOOK2Q96ED9 719 aa16.96■□□□□ 0.3
CBX3-201ENST00000337620 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.3
CBX3-201ENST00000337620 ZC3H4Q9UPT8 1303 aaKnown RBP16.95■□□□□ 0.3
CBX3-201ENST00000337620 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 TPRNQ4KMQ1 711 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.38e-6■■□□□ 13.6
CBX3-201ENST00000337620 RRP36Q96EU6 259 aaKnown RBP16.95■□□□□ 0.3
CBX3-201ENST00000337620 ZNF396Q96N95 335 aaPredicted RBP16.95■□□□□ 0.3
CBX3-201ENST00000337620 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 PPP2R3BQ9Y5P8 575 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
CBX3-201ENST00000337620 PITPNM2Q9BZ72 1349 aa16.95■□□□□ 0.3
CBX3-201ENST00000337620 SKOR2Q2VWA4 1001 aaPredicted RBP16.94■□□□□ 0.3
CBX3-201ENST00000337620 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
CBX3-201ENST00000337620 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 PIGSQ96S52 555 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 PHF20Q9BVI0 1012 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 ZNF341Q9BYN7 854 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 SCAND2PQ9GZW5 306 aaPredicted RBP16.94■□□□□ 0.3
CBX3-201ENST00000337620 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
CBX3-201ENST00000337620 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
CBX3-201ENST00000337620 NDUFB10O96000 172 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
CBX3-201ENST00000337620 EPHX2P34913 555 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 SLC16A2P36021 539 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 NLRP5P59047 1200 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 HEATR3Q7Z4Q2 680 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
CBX3-201ENST00000337620 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 OXER1Q8TDS5 423 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 NUP88Q99567 741 aaPredicted RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
CBX3-201ENST00000337620 FOXP1Q9H334 677 aaPredicted RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 INPP5BP32019 993 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 NR5A1Q13285 461 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 WWC2Q6AWC2 1192 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
CBX3-201ENST00000337620 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 ADGRF4Q8IZF3 695 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 GMCL1Q96IK5 515 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 BRMS1Q9HCU9 246 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 GOPCQ9HD26 462 aa16.93■□□□□ 0.3
CBX3-201ENST00000337620 KRT2P35908 639 aa16.92■□□□□ 0.3
CBX3-201ENST00000337620 ATL3Q6DD88 541 aa16.92■□□□□ 0.3
CBX3-201ENST00000337620 WRNIP1Q96S55 665 aa16.92■□□□□ 0.3
CBX3-201ENST00000337620 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
CBX3-201ENST00000337620 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
CBX3-201ENST00000337620 ADM5C9JUS6 153 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 BMP3P12645 472 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
CBX3-201ENST00000337620 PRKG1Q13976 671 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 LEO1Q8WVC0 666 aaPredicted RBP16.91■□□□□ 0.3
CBX3-201ENST00000337620 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
CBX3-201ENST00000337620 SH2D4AQ9H788 454 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 MYH15Q9Y2K3 1946 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 STXBP3O00186 592 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 EAPPQ56P03 285 aaPredicted RBP16.91■□□□□ 0.3
CBX3-201ENST00000337620 KRT26Q7Z3Y9 468 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 GPT2Q8TD30 523 aa16.91■□□□□ 0.3
CBX3-201ENST00000337620 ZKSCAN4Q969J2 545 aaPredicted RBP16.91■□□□□ 0.3
CBX3-201ENST00000337620 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
CBX3-201ENST00000337620 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
CBX3-201ENST00000337620 TMEM232C9JQI7 657 aa16.9■□□□□ 0.3
CBX3-201ENST00000337620 KIAA1755Q5JYT7 1200 aa16.9■□□□□ 0.3
CBX3-201ENST00000337620 TYW1BQ6NUM6 668 aa16.9■□□□□ 0.3
CBX3-201ENST00000337620 FEZ1Q99689 392 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms