RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RPS6KA1Q15418 735 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 STAG1Q8WVM7 1258 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 TRIM7Q9C029 511 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 A1BGP04217 495 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 IL2RBP14784 551 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 RASSF7Q02833 373 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 TMEM266Q2M3C6 531 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 GNPTABQ3T906 1256 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 SAAL1Q96ER3 474 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 CNNM2Q9H8M5 875 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 UBAP1LF5GYI3 381 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 TULP2O00295 520 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 MBD4O95243 580 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 IGHMBP2P38935 993 aaKnown RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 USP14P54578 494 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 PPARAQ07869 468 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 RAD9BQ6WBX8 426 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 MAGEB6Q8N7X4 407 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 PPFIBP2Q8ND30 876 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 APPBP2Q92624 585 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 ZNF496Q96IT1 587 aaPredicted RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 MMS19Q96T76 1030 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 NOVA2Q9UNW9 492 aaKnown RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 TRPM2O94759 1503 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 ZAP70P43403 619 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 POLE2P56282 527 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 ZKSCAN8Q15776 578 aaPredicted RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 TSNAXIP1Q2TAA8 658 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 TRIML1Q8N9V2 468 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 CCDC197Q8NCU1 140 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 SYMPKQ92797 1274 aaKnown RBP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 IRAK4Q9NWZ3 460 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 ZRANB2O95218 330 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL2A1-201ENST00000337299 SEC24CP53992 1094 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 ARHGEF25Q86VW2 580 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 TMTC2Q8N394 836 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 C8orf37Q96NL8 207 aa14.68□□□□□ -0.06
COL2A1-201ENST00000337299 LRRIQ3A6PVS8 624 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 ZNF185O15231 689 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 RGS16O15492 202 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 MEFVO15553 781 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 SKAP2O75563 359 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 ATP1A1P05023 1023 aaKnown RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 ERCC5P28715 1186 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 GCKRQ14397 625 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 STIM2Q9P246 746 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 MTRF1LQ9UGC7 380 aaKnown RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 RASAL2Q9UJF2 1139 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 UTP11Q9Y3A2 253 aaKnown RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 ZNF131P52739 623 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 ADCY1Q08828 1119 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 RNF10Q8N5U6 811 aaKnown RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 TC2NQ8N9U0 490 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 EPSTI1Q96J88 318 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 UIMC1Q96RL1 719 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 STMN4Q9H169 189 aaPredicted RBP14.67□□□□□ -0.06
COL2A1-201ENST00000337299 SLAIN2Q9P270 581 aa14.67□□□□□ -0.06
COL2A1-201ENST00000337299 LRRD1A4D1F6 860 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 FTCDO95954 541 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 CYP7A1P22680 504 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 GBP1P32455 592 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 KCNV2Q8TDN2 545 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 KLHL29Q96CT2 875 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 TMEM87BQ96K49 555 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 L1RE1Q9UN81 338 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 TFR2Q9UP52 801 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 KRT31Q15323 416 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 MUM1Q2TAK8 710 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 C6orf163Q5TEZ5 329 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 HOOK3Q86VS8 718 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 ARMC2Q8NEN0 867 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 NKIRAS1Q9NYS0 192 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 PPP6R2O75170 966 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 NAIF1Q69YI7 327 aaPredicted RBP14.66□□□□□ -0.06
COL2A1-201ENST00000337299 STMN2Q93045 179 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 ARMT1Q9H993 441 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 HAUS2Q9NVX0 235 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 POLA2Q14181 598 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 TAF11Q15544 211 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 EHD4Q9H223 541 aa14.66□□□□□ -0.06
COL2A1-201ENST00000337299 EYA2O00167 538 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 CETN3O15182 167 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 KCNJ6P48051 423 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 DNM2P50570 870 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 PARP9Q8IXQ6 854 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 BPIFA3Q9BQP9 254 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 TRIM4Q9C037 500 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■□□ 18.2
COL2A1-201ENST00000337299 KRT14P02533 472 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms