RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 CLIP2Q9UDT6 1046 aa9.9□□□□□ -0.82
PACRG-201ENST00000337019 RAD50Q92878 1312 aa9.9□□□□□ -0.82
PACRG-201ENST00000337019 PCP11498 1178 aaKnown RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 RGS2P41220 211 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 IKQ13123 557 aaPredicted RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 IRF5Q13568 498 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 CLEC17AQ6ZS10 378 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 PLEKHH3Q7Z736 793 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 NEDD1Q8NHV4 660 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 CEP95Q96GE4 821 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 GRPEL1Q9HAV7 217 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 RRAGDQ9NQL2 400 aaPredicted RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 RBPJLQ9UBG7 517 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 CTNNA3Q9UI47 895 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 ANAPC4Q9UJX5 808 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 SYNPO2Q9UMS6 1093 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 GABRQQ9UN88 632 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 STX8Q9UNK0 236 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 ZNF213O14771 459 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 CDC45O75419 566 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 FGAP02671 866 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 FAM83BQ5T0W9 1011 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 MFSD6Q6ZSS7 791 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 GPR142Q7Z601 462 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 LRRC47Q8N1G4 583 aaKnown RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 TNPO1Q92973 898 aaKnown RBP9.89□□□□□ -0.83
PACRG-201ENST00000337019 TXNRD2Q9NNW7 524 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 MTMR4Q9NYA4 1195 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
PACRG-201ENST00000337019 ORC4O43929 436 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 HMGCRP04035 888 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 INHAP05111 366 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 GSPT1P15170 499 aaKnown RBP9.88□□□□□ -0.83
PACRG-201ENST00000337019 ELNP15502 786 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 ZKSCAN1P17029 563 aaPredicted RBP9.88□□□□□ -0.83
PACRG-201ENST00000337019 DSG3P32926 999 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 COPB2P35606 906 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 HAND2P61296 217 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 APBA2Q99767 749 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 SLF1Q9BQI6 1058 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 DSCC1Q9BVC3 393 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 RNF208Q9H0X6 261 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 PORCNQ9H237 461 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
PACRG-201ENST00000337019 ZSWIM8A7E2V4 1837 aa9.88□□□□□ -0.83
PACRG-201ENST00000337019 F5H6K3 240 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 FOXP2O15409 715 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 SLC25A27O95847 323 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 NDUFB10O96000 172 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 CCL5P13501 91 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 CYP2B6P20813 491 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 RGS19P49795 217 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 NT5C2P49902 561 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
PACRG-201ENST00000337019 KLRC3Q07444 240 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 NCAPG2Q86XI2 1143 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 SIAH1Q8IUQ4 282 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 SHCBP1Q8NEM2 672 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 ESR2Q92731 530 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
PACRG-201ENST00000337019 SPATC1LQ9H0A9 340 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 BTBD7Q9P203 1132 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 PPP1R9AQ9ULJ8 1098 aa9.87□□□□□ -0.83
PACRG-201ENST00000337019 IGKV6D-41A0A0C4DH26 115 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 SLC15A5A6NIM6 579 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 PEX10O60683 326 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 ZBED4O75132 1171 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 CNMDO75829 334 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
PACRG-201ENST00000337019 SLC1A4P43007 532 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 RABEP1Q15276 862 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 KIAA1755Q5JYT7 1200 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 SLFN13Q68D06 897 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 CASC1Q6TDU7 716 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 KIAA1211Q6ZU35 1233 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 IQCA1Q86XH1 822 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 GMCL1P1Q8NEA9 526 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 NUP88Q99567 741 aaPredicted RBP9.86□□□□□ -0.83
PACRG-201ENST00000337019 KIF2CQ99661 725 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 GZF1Q9H116 711 aaPredicted RBP9.86□□□□□ -0.83
PACRG-201ENST00000337019 MROH8Q9H579 483 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 FEM1BQ9UK73 627 aa9.86□□□□□ -0.83
PACRG-201ENST00000337019 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
PACRG-201ENST00000337019 STRNO43815 780 aa9.85□□□□□ -0.83
PACRG-201ENST00000337019 BMP3P12645 472 aa9.85□□□□□ -0.83
PACRG-201ENST00000337019 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms