RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 HNRNPLLQ8WVV9 542 aaKnown RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 UBXN4Q92575 508 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 DCP1AQ9NPI6 582 aaPredicted RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 TAF3Q5VWG9 929 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 IQUBQ8NA54 791 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 MTRQ99707 1265 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.18■□□□□ 0.021e-25■■■■□ 21.5
RC3H2-201ENST00000335387 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 V9GYY5 206 aaPredicted RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 GYG1P46976 350 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 KCNB1Q14721 858 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 DDB1Q16531 1140 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
RC3H2-201ENST00000335387 ZNF658Q5TYW1 1059 aaPredicted RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
RC3H2-201ENST00000335387 USP5P45974 858 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 GOLGA8FQ08AF8 430 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 GOLGA8DPQ0D2H9 430 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 COBLL1Q53SF7 1204 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 RC3H1Q5TC82 1133 aaKnown RBP15.17■□□□□ 0.02
RC3H2-201ENST00000335387 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 DHX58Q96C10 678 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 RMND1Q9NWS8 449 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 TEX33O43247 280 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 GYPCP04921 128 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 CALML3P27482 149 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
RC3H2-201ENST00000335387 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
RC3H2-201ENST00000335387 RBL2Q08999 1139 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 CCDC178Q5BJE1 867 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 RAD9BQ6WBX8 426 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 RAB21Q9UL25 225 aa15.17■□□□□ 0.02
RC3H2-201ENST00000335387 SMIM22K7EJ46 135 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 LAD1O00515 517 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
RC3H2-201ENST00000335387 PTGDRQ13258 359 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 CARD6Q9BX69 1037 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 TTF2Q9UNY4 1162 aaKnown RBP15.16■□□□□ 0.02
RC3H2-201ENST00000335387 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 PRPHP41219 470 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 MECOMQ03112 1051 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 C15orf52Q6ZUT6 534 aaKnown RBP15.16■□□□□ 0.02
RC3H2-201ENST00000335387 IGSF22Q8N9C0 903 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
RC3H2-201ENST00000335387 A0A1W2PQC6 194 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 PPP2R3AQ06190 1150 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
RC3H2-201ENST00000335387 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
RC3H2-201ENST00000335387 MAGEF1Q9HAY2 307 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 NOVP48745 357 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 GRM4Q14833 912 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 TMTC1Q8IUR5 882 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 MNS1Q8NEH6 495 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 URI1O94763 535 aaPredicted RBP15.15■□□□□ 0.02
RC3H2-201ENST00000335387 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 GNG11P61952 73 aa15.15■□□□□ 0.02
RC3H2-201ENST00000335387 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
RC3H2-201ENST00000335387 GREB1LQ9C091 1923 aaPredicted RBP15.14■□□□□ 0.01
RC3H2-201ENST00000335387 KIF5BP33176 963 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
RC3H2-201ENST00000335387 BRD3Q15059 726 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 FILIP1LQ4L180 1135 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 TMCO3Q6UWJ1 677 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 CCSER1Q9C0I3 900 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 PCDHA4Q9UN74 947 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 USP17L21D6R901 530 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 PRDM1O75626 825 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 TXLNAP40222 546 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 KRT31Q15323 416 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 TCP11X2Q5H9J9 407 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 SRGAP1Q7Z6B7 1085 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 LINC00116Q8NCU8 138 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 CUEDC2Q9H467 287 aa15.14■□□□□ 0.01
RC3H2-201ENST00000335387 SOWAHDA6NJG2 315 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 MAP2K7O14733 419 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 SMARCA1P28370 1054 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
RC3H2-201ENST00000335387 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
RC3H2-201ENST00000335387 PDILTQ8N807 584 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
RC3H2-201ENST00000335387 ABHD10Q9NUJ1 306 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 H7C1D1 291 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 PPP4CP60510 307 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 ADSSL1Q8N142 457 aa15.13■□□□□ 0.01
RC3H2-201ENST00000335387 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms