RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 FAM177A1Q8N128 213 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-201ENST00000334859 SLC44A5Q8NCS7 719 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 RASGRP4Q8TDF6 673 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 TGFBRAP1Q8WUH2 860 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 CTNND2Q9UQB3 1225 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 STX10O60499 249 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 E2F4Q16254 413 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 IL17AQ16552 155 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 ZNF397Q8NF99 534 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-201ENST00000334859 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
LRCH3-201ENST00000334859 STX8Q9UNK0 236 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
LRCH3-201ENST00000334859 TOGARAM2Q6ZUX3 1019 aa20.08■□□□□ 0.81
LRCH3-201ENST00000334859 FEZ1Q99689 392 aa20.08■□□□□ 0.81
LRCH3-201ENST00000334859 PCDHA4Q9UN74 947 aa20.08■□□□□ 0.81
LRCH3-201ENST00000334859 NAV1Q8NEY1 1877 aa20.08■□□□□ 0.81
LRCH3-201ENST00000334859 ROBO3Q96MS0 1386 aa20.08■□□□□ 0.8
LRCH3-201ENST00000334859 PPP1R3GB7ZBB8 358 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 TEX33O43247 280 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 GRM4Q14833 912 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 TRIM65Q6PJ69 517 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 MAPKAPK5Q8IW41 473 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 LRRN4CLQ8ND94 238 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 PYM1Q9BRP8 204 aaKnown RBP20.07■□□□□ 0.8
LRCH3-201ENST00000334859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.07■□□□□ 0.84e-8■■□□□ 14.5
LRCH3-201ENST00000334859 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 TXLNAP40222 546 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 HEATR3Q7Z4Q2 680 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
LRCH3-201ENST00000334859 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
LRCH3-201ENST00000334859 SH3GLB2Q9NR46 395 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 TAF1LQ8IZX4 1826 aa20.07■□□□□ 0.8
LRCH3-201ENST00000334859 COBLO75128 1261 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 CDC25AP30304 524 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 GNAQP50148 359 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 KMT5BQ4FZB7 885 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 CDKAL1Q5VV42 579 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 RRAGBQ5VZM2 374 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 APTXQ7Z2E3 356 aaKnown RBP20.06■□□□□ 0.8
LRCH3-201ENST00000334859 MAD2L2Q9UI95 211 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 URI1O94763 535 aaPredicted RBP20.06■□□□□ 0.8
LRCH3-201ENST00000334859 ARL6IP4Q66PJ3 421 aaKnown RBP20.06■□□□□ 0.8
LRCH3-201ENST00000334859 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 FBXO38Q6PIJ6 1188 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 PPFIBP1Q86W92 1011 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 RASSF8Q8NHQ8 419 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 RPGRQ92834 1020 aaKnown RBP20.06■□□□□ 0.8
LRCH3-201ENST00000334859 CTAGE1Q96RT6 745 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 ZMYND15Q9H091 742 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 USP21Q9UK80 565 aa20.06■□□□□ 0.8
LRCH3-201ENST00000334859 GOLGA6L9A6NEM1 432 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 AKR1B15C9JRZ8 316 aaPredicted RBP20.05■□□□□ 0.8
LRCH3-201ENST00000334859 ERCC6LQ2NKX8 1250 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 FILIP1LQ4L180 1135 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 DESI2Q9BSY9 194 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
LRCH3-201ENST00000334859 FANCGO15287 622 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 GTPBP6O43824 516 aaPredicted RBP20.05■□□□□ 0.8
LRCH3-201ENST00000334859 LDHCP07864 332 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 LONP1P36776 959 aaKnown RBP20.05■□□□□ 0.8
LRCH3-201ENST00000334859 STAT6P42226 847 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 NT5C2P49902 561 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 CCDC178Q5BJE1 867 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 WWC2Q6AWC2 1192 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 CCDC148Q8NFR7 591 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 CPLX3Q8WVH0 158 aa20.05■□□□□ 0.8
LRCH3-201ENST00000334859 UFL1O94874 794 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 KARSQ15046 597 aaKnown RBP20.04■□□□□ 0.8
LRCH3-201ENST00000334859 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 MTRQ99707 1265 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 CCT6AP40227 531 aaKnown RBP20.04■□□□□ 0.8
LRCH3-201ENST00000334859 PPP4CP60510 307 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 GNG11P61952 73 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 TMEM47Q9BQJ4 181 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 OGFRQ9NZT2 677 aa20.04■□□□□ 0.8
LRCH3-201ENST00000334859 ZBTB22O15209 634 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 GOLGA8HP0CJ92 632 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 BTDP43251 543 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 GPSM2P81274 684 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 RBL2Q08999 1139 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 SLC35G1Q2M3R5 365 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 FNBP4Q8N3X1 1017 aaPredicted RBP20.03■□□□□ 0.8
LRCH3-201ENST00000334859 C4orf32Q8N8J7 132 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 MNS1Q8NEH6 495 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 RTFDC1Q9BY42 306 aaPredicted RBP20.03■□□□□ 0.8
LRCH3-201ENST00000334859 RMND1Q9NWS8 449 aa20.03■□□□□ 0.8
LRCH3-201ENST00000334859 THSD7AQ9UPZ6 1657 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 CYTH3O43739 400 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 RASA1P20936 1047 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 PAK1Q13153 545 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 MTF1Q14872 753 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 INF2Q27J81 1249 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 DTHD1Q6ZMT9 781 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms