RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 MLKLQ8NB16 471 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 RNF217Q8TC41 542 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 PCP11498 1178 aaKnown RBP23.23■■□□□ 1.31
SPNS1-203ENST00000334536 XBP1P17861 261 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 POSTNQ15063 836 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 DDB1Q16531 1140 aa23.23■■□□□ 1.31
SPNS1-203ENST00000334536 SPATS2Q86XZ4 545 aaKnown RBP23.22■■□□□ 1.31
SPNS1-203ENST00000334536 CCDC102AQ96A19 550 aa23.22■■□□□ 1.31
SPNS1-203ENST00000334536 TAOK2Q9UL54 1235 aa23.22■■□□□ 1.31
SPNS1-203ENST00000334536 FAM169AQ9Y6X4 670 aa23.22■■□□□ 1.31
SPNS1-203ENST00000334536 CHUKO15111 745 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 GCFC2P16383 781 aaKnown RBP23.21■■□□□ 1.31
SPNS1-203ENST00000334536 SARSP49591 514 aaKnown RBP23.21■■□□□ 1.31
SPNS1-203ENST00000334536 AKAP17AQ02040 695 aaKnown RBP23.21■■□□□ 1.31
SPNS1-203ENST00000334536 ITPK1Q13572 414 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 CLEC4GQ6UXB4 293 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 AMOTL1Q8IY63 956 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 VEZTQ9HBM0 779 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 MAN1B1Q9UKM7 699 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 N4BP1O75113 896 aaKnown RBP23.21■■□□□ 1.31
SPNS1-203ENST00000334536 CRYMQ14894 314 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 TEX11Q8IYF3 940 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 NUP133Q8WUM0 1156 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 WDR24Q96S15 920 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 BRIP1Q9BX63 1249 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 FANCLQ9NW38 375 aa23.21■■□□□ 1.31
SPNS1-203ENST00000334536 SPATA31A1Q5TZJ5 1347 aa23.2■■□□□ 1.31
SPNS1-203ENST00000334536 NRAPQ86VF7 1730 aa23.2■■□□□ 1.31
SPNS1-203ENST00000334536 INPP5BP32019 993 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 PREPLQ4J6C6 727 aaPredicted RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 ANKRD18AQ8IVF6 992 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 ENOX1Q8TC92 643 aaKnown RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 DPF2Q92785 391 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 SMARCC1Q92922 1105 aaPredicted RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 DHX58Q96C10 678 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 TNKSO95271 1327 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 TOP1P11387 765 aaKnown RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 RDXP35241 583 aaKnown RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 LIG3P49916 1009 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 MORC3Q14149 939 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 FAM212AQ96EL1 285 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 FAXDC2Q96IV6 333 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 RIOK1Q9BRS2 568 aaKnown RBP23.2■■□□□ 1.3
SPNS1-203ENST00000334536 ABCB6Q9NP58 842 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 SERTAD1Q9UHV2 236 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 PCDHB6Q9Y5E3 794 aa23.2■■□□□ 1.3
SPNS1-203ENST00000334536 MINDY4BA8MYZ0 360 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 POLR2DO15514 142 aaKnown RBP23.19■■□□□ 1.3
SPNS1-203ENST00000334536 PRPF3O43395 683 aaKnown RBP23.19■■□□□ 1.3
SPNS1-203ENST00000334536 STX10O60499 249 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 BMP15O95972 392 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 CALM1P0DP23 149 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 CALM2P0DP24 149 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 CALM3P0DP25 149 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 BMP6P22004 513 aa23.19■■□□□ 1.3
SPNS1-203ENST00000334536 SSR1P43307 286 aaKnown RBP23.19■■□□□ 1.3
SPNS1-203ENST00000334536 MRPL12P52815 198 aaKnown RBP23.19■■□□□ 1.3
SPNS1-203ENST00000334536 ANKRD65E5RJM6 399 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 PRPF6O94906 941 aaKnown RBP23.18■■□□□ 1.3
SPNS1-203ENST00000334536 FGRP09769 529 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 NR5A1Q13285 461 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 KIF4BQ2VIQ3 1234 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 TMEM139Q8IV31 216 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 ZSCAN10Q96SZ4 725 aaPredicted RBP23.18■■□□□ 1.3
SPNS1-203ENST00000334536 AATFQ9NY61 560 aaKnown RBP eCLIP23.18■■□□□ 1.3
SPNS1-203ENST00000334536 CDC23Q9UJX2 597 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 A6NNZ2 444 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 RGL2O15211 777 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 RNF40O75150 1001 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 PDE4BQ07343 736 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 TUBB8Q3ZCM7 444 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 CAVIN4Q5BKX8 364 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 WDR93Q6P2C0 686 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 CATIPQ7Z7H3 387 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 ABCF2Q9UG63 623 aa23.18■■□□□ 1.3
SPNS1-203ENST00000334536 TRIM75PA6NK02 468 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 SEMA3EO15041 775 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 FOXN1O15353 648 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 ACTN4O43707 911 aaKnown RBP23.17■■□□□ 1.3
SPNS1-203ENST00000334536 MCM3P25205 808 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 NF2P35240 595 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 SPECC1Q5M775 1068 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 SPATA20Q8TB22 786 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 SDR42E1Q8WUS8 393 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 CABP5Q9NP86 173 aa23.17■■□□□ 1.3
SPNS1-203ENST00000334536 H0YHG0 523 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 FSBPO95073 299 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 ZNF18P17022 549 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 KRT2P35908 639 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 SARNPP82979 210 aaKnown RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 GRIN1Q05586 938 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 CCDC82Q8N4S0 544 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 OXER1Q8TDS5 423 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 PHF20Q9BVI0 1012 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 SCP2P22307 547 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms