RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 COL24A1Q17RW2 1714 aa26.5■■□□□ 1.83
NDEL1-201ENST00000334527 SOWAHDA6NJG2 315 aa26.5■■□□□ 1.83
NDEL1-201ENST00000334527 RPS6KA4O75676 772 aa26.5■■□□□ 1.83
NDEL1-201ENST00000334527 TMED8Q6PL24 325 aaPredicted RBP26.5■■□□□ 1.83
NDEL1-201ENST00000334527 BLIDQ8IZY5 108 aa26.5■■□□□ 1.83
NDEL1-201ENST00000334527 GPKOWQ92917 476 aaPredicted RBP eCLIP26.5■■□□□ 1.83
NDEL1-201ENST00000334527 GNPATO15228 680 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 COBLO75128 1261 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 TADA3O75528 432 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 RRAGBQ5VZM2 374 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 USP5P45974 858 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 PNMA1Q8ND90 353 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 PKNOX2Q96KN3 472 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 MTRQ99707 1265 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 IL17RBQ9NRM6 502 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 FAM53CQ9NYF3 392 aa26.49■■□□□ 1.83
NDEL1-201ENST00000334527 GTPBP6O43824 516 aaPredicted RBP26.48■■□□□ 1.83
NDEL1-201ENST00000334527 CLCN6P51797 869 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 KARSQ15046 597 aaKnown RBP26.48■■□□□ 1.83
NDEL1-201ENST00000334527 C12orf60Q5U649 245 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 FAM205AQ6ZU69 1335 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 EFCAB8A8MWE9 144 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 CCDC175P0C221 793 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 TM4SF1P30408 202 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 RC3H1Q5TC82 1133 aaKnown RBP26.48■■□□□ 1.83
NDEL1-201ENST00000334527 DGKHQ86XP1 1220 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 DYNLL2Q96FJ2 89 aa26.48■■□□□ 1.83
NDEL1-201ENST00000334527 IRS2Q9Y4H2 1338 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 ARL6IP4Q66PJ3 421 aaKnown RBP26.47■■□□□ 1.83
NDEL1-201ENST00000334527 STAG2Q8N3U4 1231 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 NAA15Q9BXJ9 866 aaKnown RBP26.47■■□□□ 1.83
NDEL1-201ENST00000334527 MRPL44Q9H9J2 332 aaKnown RBP26.47■■□□□ 1.83
NDEL1-201ENST00000334527 MAP3K9P80192 1104 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 KIFC2Q96AC6 838 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 SH3GLB2Q9NR46 395 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 MKRN1Q9UHC7 482 aaKnown RBP26.47■■□□□ 1.83
NDEL1-201ENST00000334527 PCDHA4Q9UN74 947 aa26.47■■□□□ 1.83
NDEL1-201ENST00000334527 MFAP3LO75121 409 aa26.46■■□□□ 1.83
NDEL1-201ENST00000334527 LDHBP07195 334 aaKnown RBP26.46■■□□□ 1.83
NDEL1-201ENST00000334527 LONP1P36776 959 aaKnown RBP26.46■■□□□ 1.83
NDEL1-201ENST00000334527 CCT6AP40227 531 aaKnown RBP26.46■■□□□ 1.83
NDEL1-201ENST00000334527 RAD9BQ6WBX8 426 aa26.46■■□□□ 1.83
NDEL1-201ENST00000334527 C4orf32Q8N8J7 132 aa26.46■■□□□ 1.83
NDEL1-201ENST00000334527 SH3RF3Q8TEJ3 882 aaPredicted RBP26.46■■□□□ 1.83
NDEL1-201ENST00000334527 RWDD2AQ9UIY3 292 aa26.46■■□□□ 1.83
NDEL1-201ENST00000334527 RASGRP4Q8TDF6 673 aa26.46■■□□□ 1.83
NDEL1-201ENST00000334527 IGSF3O75054 1194 aa26.45■■□□□ 1.82
NDEL1-201ENST00000334527 CDC25AP30304 524 aa26.45■■□□□ 1.82
NDEL1-201ENST00000334527 TXLNAP40222 546 aa26.45■■□□□ 1.82
NDEL1-201ENST00000334527 MKNK2Q9HBH9 465 aa26.45■■□□□ 1.82
NDEL1-201ENST00000334527 MRFAP1Q9Y605 127 aa26.45■■□□□ 1.82
NDEL1-201ENST00000334527 CASP14P31944 242 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 GABPB1Q06547 395 aaPredicted RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 PAK1Q13153 545 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 GRM4Q14833 912 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 KRT31Q15323 416 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 RMND1Q9NWS8 449 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 ANKIB1Q9P2G1 1089 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 RPN1P04843 607 aaKnown RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 BMS1Q14692 1282 aaKnown RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 ZNF658Q5TYW1 1059 aaPredicted RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 ARGLU1Q9NWB6 273 aaPredicted RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 LIMA1Q9UHB6 759 aaKnown RBP26.44■■□□□ 1.82
NDEL1-201ENST00000334527 ADGRG1Q9Y653 693 aa26.44■■□□□ 1.82
NDEL1-201ENST00000334527 USP17L3A6NCW0 530 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 USP17L4A6NCW7 530 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 GYPCP04921 128 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 STAT6P42226 847 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 TYW1BQ6NUM6 668 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 USP17L1Q7RTZ2 530 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 SLC51AQ86UW1 340 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 ANKS1AQ92625 1134 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 MAD2L2Q9UI95 211 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 CNGA4Q8IV77 575 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 WDR66Q8TBY9 1149 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 NELFBQ8WX92 580 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 LZTFL1Q9NQ48 299 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 ZHX1Q9UKY1 873 aaPredicted RBP26.43■■□□□ 1.82
NDEL1-201ENST00000334527 ITIH6Q6UXX5 1313 aa26.43■■□□□ 1.82
NDEL1-201ENST00000334527 CCDC194A0A1B0GVG4 234 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 N4BP3O15049 544 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 TPM1P09493 284 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 FXR1P51114 621 aaKnown RBP eCLIP26.42■■□□□ 1.82
NDEL1-201ENST00000334527 PPP2R3AQ06190 1150 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 CCDC12Q8WUD4 166 aaPredicted RBP26.42■■□□□ 1.82
NDEL1-201ENST00000334527 RTCBQ9Y3I0 505 aaKnown RBP26.42■■□□□ 1.82
NDEL1-201ENST00000334527 TSPY3P0CV98 308 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 TSPY8P0CW00 308 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 GNAQP50148 359 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 DIXDC1Q155Q3 683 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 AMIGO3Q86WK7 504 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 AMOTL1Q8IY63 956 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 IRX2Q9BZI1 471 aaPredicted RBP26.42■■□□□ 1.82
NDEL1-201ENST00000334527 VPS16Q9H269 839 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 MTMR7Q9Y216 660 aa26.42■■□□□ 1.82
NDEL1-201ENST00000334527 TNRC6CQ9HCJ0 1690 aaKnown RBP26.41■■□□□ 1.82
NDEL1-201ENST00000334527 ROBO3Q96MS0 1386 aa26.41■■□□□ 1.82
NDEL1-201ENST00000334527 M0R2N6 131 aa26.41■■□□□ 1.82
NDEL1-201ENST00000334527 NT5C2P49902 561 aa26.41■■□□□ 1.82
NDEL1-201ENST00000334527 ARHGEF1Q92888 912 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms