RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 C5P01031 1676 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 VEGFAP15692 232 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-201ENST00000334136 ELF2Q15723 593 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 TMEM179Q6ZVK1 233 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
HDAC6-201ENST00000334136 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 GNA11P29992 359 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 STAG1Q8WVM7 1258 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-201ENST00000334136 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 KIF20AO95235 890 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 LIG1P18858 919 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 EPHX2P34913 555 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 MMP14P50281 582 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 TBC1D10CQ8IV04 446 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 DPF2Q92785 391 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 ZNF274Q96GC6 653 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-201ENST00000334136 PYCARDQ9ULZ3 195 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 DEXIO95424 95 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 PHKBQ93100 1093 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
HDAC6-201ENST00000334136 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■■■■□ 25.6
HDAC6-201ENST00000334136 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 MPHOSPH6Q99547 160 aaKnown RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 ARFGAP3Q9NP61 516 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 VGLL3A8MV65 326 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 NT5C2P49902 561 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 DEF6Q9H4E7 631 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 SOCS7O14512 581 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 VIL1P09327 827 aaKnown RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
HDAC6-201ENST00000334136 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
HDAC6-201ENST00000334136 TMEM232C9JQI7 657 aa13.33□□□□□ -0.27
HDAC6-201ENST00000334136 FLOT1O75955 427 aa13.33□□□□□ -0.27
HDAC6-201ENST00000334136 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.27
HDAC6-201ENST00000334136 USP14P54578 494 aa13.33□□□□□ -0.27
HDAC6-201ENST00000334136 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
HDAC6-201ENST00000334136 PHACTR2O75167 634 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 EPS15P42566 896 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 NFIAQ12857 509 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 SEPT2Q15019 361 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 ME3Q16798 604 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 CCDC181Q5TID7 509 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
HDAC6-201ENST00000334136 RTFDC1Q9BY42 306 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-201ENST00000334136 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 SYKP43405 635 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 CMTR1Q8N1G2 835 aaKnown RBP13.33□□□□□ -0.28
HDAC6-201ENST00000334136 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
HDAC6-201ENST00000334136 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-201ENST00000334136 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 ZNF75DP51815 510 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 FKBP1AP62942 108 aaKnown RBP13.32□□□□□ -0.28
HDAC6-201ENST00000334136 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
HDAC6-201ENST00000334136 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 APOA5Q6Q788 366 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 DDAH1O94760 285 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 KIAA0754O94854 1291 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 GPATCH4Q5T3I0 446 aaKnown RBP13.32□□□□□ -0.28
HDAC6-201ENST00000334136 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 TTC14Q96N46 770 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 DNA2P51530 1060 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 USH1GQ495M9 461 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
HDAC6-201ENST00000334136 B4DLN1 442 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 PLCD1P51178 756 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 CERS5Q8N5B7 392 aa13.32□□□□□ -0.28
HDAC6-201ENST00000334136 PDIA3P30101 505 aaKnown RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 NSMFQ6X4W1 530 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 RAB34Q9BZG1 259 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 EPB41L4AQ9HCS5 686 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 HOMER2Q9NSB8 354 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms