RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SPECC1LQ69YQ0 1117 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 PSDA5PKW4 1024 aaPredicted RBP21.49■■□□□ 1.03
RFTN1-201ENST00000334133 TRIML1Q8N9V2 468 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 RIMBP2O15034 1052 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 FANCGO15287 622 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 RASA1P20936 1047 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 CCT6AP40227 531 aaKnown RBP21.49■■□□□ 1.03
RFTN1-201ENST00000334133 MTF1Q14872 753 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 TMEM139Q8IV31 216 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 AMOTL1Q8IY63 956 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 TEX11Q8IYF3 940 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 TC2NQ8N9U0 490 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 RASSF8Q8NHQ8 419 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 BAG1Q99933 345 aaPredicted RBP21.49■■□□□ 1.03
RFTN1-201ENST00000334133 RTFDC1Q9BY42 306 aaPredicted RBP21.49■■□□□ 1.03
RFTN1-201ENST00000334133 TMEM60Q9H2L4 133 aa21.49■■□□□ 1.03
RFTN1-201ENST00000334133 C6orf229H3BNL8 230 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 USP17L2Q6R6M4 530 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 TOGARAM2Q6ZUX3 1019 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 DGKHQ86XP1 1220 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 PPP1R3GB7ZBB8 358 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 SERPINB2P05120 415 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
RFTN1-201ENST00000334133 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 RRAGBQ5VZM2 374 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 COL24A1Q17RW2 1714 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 CCDC194A0A1B0GVG4 234 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
RFTN1-201ENST00000334133 GJD4Q96KN9 370 aaPredicted RBP21.48■■□□□ 1.03
RFTN1-201ENST00000334133 BMP15O95972 392 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 GYS1P13807 737 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 E2F4Q16254 413 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 CCDC34Q96HJ3 373 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 PCDHA4Q9UN74 947 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 LAMB1P07942 1786 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 EIF6P56537 245 aaKnown RBP21.47■■□□□ 1.03
RFTN1-201ENST00000334133 TBX2Q13207 712 aaPredicted RBP21.47■■□□□ 1.03
RFTN1-201ENST00000334133 PICALMQ13492 652 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 KCND1Q9NSA2 647 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 GDAQ9Y2T3 454 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 DLEC1Q9Y238 1755 aa21.47■■□□□ 1.03
RFTN1-201ENST00000334133 GRM4Q14833 912 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 CLEC10AQ8IUN9 316 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 REXO1L1PQ8IX06 675 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 SEPT12Q8IYM1 358 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 EYA3Q99504 573 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 GGA1Q9UJY5 639 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 KLRF2D3W0D1 207 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 ERCC5P28715 1186 aaPredicted RBP21.46■■□□□ 1.03
RFTN1-201ENST00000334133 CDK8P49336 464 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 GSTO1P78417 241 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 NR1I3Q14994 352 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 SPATA1Q5VX52 437 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 PDXDC2PQ6P474 469 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 EEF2KMTQ96G04 330 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 UBA5Q9GZZ9 404 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 PCDHA6Q9UN73 950 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 PPP2R2CQ9Y2T4 447 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 PCDHA8Q9Y5H6 950 aa21.46■■□□□ 1.03
RFTN1-201ENST00000334133 RGL2O15211 777 aa21.45■■□□□ 1.03
RFTN1-201ENST00000334133 SLU7O95391 586 aaKnown RBP21.45■■□□□ 1.03
RFTN1-201ENST00000334133 GSDMAQ96QA5 445 aa21.45■■□□□ 1.03
RFTN1-201ENST00000334133 ZNF831Q5JPB2 1677 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 CALML3P27482 149 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 ETF1P62495 437 aaKnown RBP21.45■■□□□ 1.02
RFTN1-201ENST00000334133 ERCC6LQ2NKX8 1250 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 APTXQ7Z2E3 356 aaKnown RBP21.45■■□□□ 1.02
RFTN1-201ENST00000334133 C4orf32Q8N8J7 132 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 SBF2Q86WG5 1849 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 SLURP2P0DP57 97 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 TRIM65Q6PJ69 517 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 MXD3Q9BW11 206 aa21.45■■□□□ 1.02
RFTN1-201ENST00000334133 A0A0U1RQJ8 604 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 URI1O94763 535 aaPredicted RBP21.44■■□□□ 1.02
RFTN1-201ENST00000334133 ATRIPQ8WXE1 791 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 VPS16Q9H269 839 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 SOWAHDA6NJG2 315 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 LDHCP07864 332 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 STAT6P42226 847 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 GTF2IP78347 998 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 RBL2Q08999 1139 aa21.44■■□□□ 1.02
RFTN1-201ENST00000334133 A0A1B0GTH6 734 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 PPP4CP60510 307 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 IGSF22Q8N9C0 903 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 CEP95Q96GE4 821 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 STXBP3O00186 592 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 ARHGAP6O43182 974 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 IRX2Q9BZI1 471 aaPredicted RBP21.43■■□□□ 1.02
RFTN1-201ENST00000334133 FLT1P17948 1338 aa21.43■■□□□ 1.02
RFTN1-201ENST00000334133 FRMPD2Q68DX3 1309 aaPredicted RBP21.43■■□□□ 1.02
RFTN1-201ENST00000334133 KIF2AO00139 706 aaPredicted RBP21.42■■□□□ 1.02
RFTN1-201ENST00000334133 MYO1BO43795 1136 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 TRAPPC10P48553 1259 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 NAPAP54920 295 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 ST5P78524 1137 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 LETM2Q2VYF4 491 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 TRIM49BA6NDI0 452 aa21.42■■□□□ 1.02
RFTN1-201ENST00000334133 DDR1Q08345 913 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms