RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 MB21D1Q8N884 522 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 SEC62Q99442 399 aaKnown RBP11.47□□□□□ -0.57
SYN3-201ENST00000332840 DSCC1Q9BVC3 393 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 VCPKMTQ9H867 229 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
SYN3-201ENST00000332840 LOC285556D6RIA3 1793 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 A0A1W2PRG0 241 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
SYN3-201ENST00000332840 CAPN2P17655 700 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 GRK4P32298 578 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 NT5C2P49902 561 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 NEK4P51957 841 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 UBXN2AP68543 259 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 PPARAQ07869 468 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 ALX1Q15699 326 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 CCDC129Q6ZRS4 1044 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 RPAP3Q9H6T3 665 aaPredicted RBP11.46□□□□□ -0.57
SYN3-201ENST00000332840 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
SYN3-201ENST00000332840 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
SYN3-201ENST00000332840 CUL9Q8IWT3 2517 aa11.46□□□□□ -0.58
SYN3-201ENST00000332840 A0A0C4DFX4 3053 aa11.46□□□□□ -0.58
SYN3-201ENST00000332840 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 MYO5AQ9Y4I1 1855 aaKnown RBP11.45□□□□□ -0.58
SYN3-201ENST00000332840 SLC27A2O14975 620 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 EEF2P13639 858 aaKnown RBP11.45□□□□□ -0.58
SYN3-201ENST00000332840 PSMA5P28066 241 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 CTGFP29279 349 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 FLT3LGP49771 235 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 ERVK-24P63145 666 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 COG2Q14746 738 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 TSGA10IPQ3SY00 556 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 PAGR1Q9BTK6 254 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
SYN3-201ENST00000332840 ANAPC4Q9UJX5 808 aa11.45□□□□□ -0.58
SYN3-201ENST00000332840 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
SYN3-201ENST00000332840 ADCY3O60266 1144 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
SYN3-201ENST00000332840 TTLL1O95922 423 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 KRT32Q14532 448 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
SYN3-201ENST00000332840 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 NEDD1Q8NHV4 660 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 IVNS1ABPQ9Y6Y0 642 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
SYN3-201ENST00000332840 PTPRFP10586 1907 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 MYH1P12882 1939 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 ORC4O43929 436 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 PRDM1O75626 825 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 FLOT1O75955 427 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
SYN3-201ENST00000332840 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
SYN3-201ENST00000332840 XRCC5P13010 732 aaKnown RBP11.43□□□□□ -0.58
SYN3-201ENST00000332840 COPB2P35606 906 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 PLEKHH3Q7Z736 793 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 CLEC10AQ8IUN9 316 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 SHCBP1Q8NEM2 672 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
SYN3-201ENST00000332840 RNF41Q9H4P4 317 aaPredicted RBP11.43□□□□□ -0.58
SYN3-201ENST00000332840 TXNRD2Q9NNW7 524 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 MTMR4Q9NYA4 1195 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 CTNNA3Q9UI47 895 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 PHIPQ8WWQ0 1821 aa11.43□□□□□ -0.58
SYN3-201ENST00000332840 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 FOXP2O15409 715 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 RAD21O60216 631 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 FGAP02671 866 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 HMGCRP04035 888 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 TFAP4Q01664 338 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 VPS53Q5VIR6 699 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 SPICE1Q8N0Z3 855 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 STK11IPQ8N1F8 1099 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 DPF3Q92784 378 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 MKL1Q969V6 931 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
SYN3-201ENST00000332840 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 GABRQQ9UN88 632 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.42□□□□□ -0.58
SYN3-201ENST00000332840 CYP46A1Q9Y6A2 500 aa11.42□□□□□ -0.58
SYN3-201ENST00000332840 STRNO43815 780 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 FGRP09769 529 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
SYN3-201ENST00000332840 RGS2P41220 211 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms