RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KLHDC9Q8NEP7 349 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 GLT1D1Q96MS3 346 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 CERS4Q9HA82 394 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 ZNFX1Q9P2E3 1918 aaKnown RBP18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 USP34Q70CQ2 3546 aa18.24■□□□□ 0.51
CTHRC1-201ENST00000330295 CCSAPQ6IQ19 270 aaPredicted RBP18.24■□□□□ 0.51
CTHRC1-201ENST00000330295 FAM126BQ8IXS8 530 aa18.24■□□□□ 0.51
CTHRC1-201ENST00000330295 SIL1Q9H173 461 aa18.24■□□□□ 0.51
CTHRC1-201ENST00000330295 MROH8Q9H579 483 aa18.24■□□□□ 0.51
CTHRC1-201ENST00000330295 TLR3O15455 904 aaKnown RBP18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 CIAO1O76071 339 aa18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 CA3P07451 260 aa18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 ZNF865P0CJ78 1059 aaPredicted RBP18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 TINF2Q9BSI4 451 aa18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
CTHRC1-201ENST00000330295 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 ARVCFO00192 962 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 NCAPG2Q86XI2 1143 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 MAPKAPK5Q8IW41 473 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 FLT1P17948 1338 aa18.22■□□□□ 0.51
CTHRC1-201ENST00000330295 A0A0U1RQG5 324 aaPredicted RBP18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 FCER1AP12319 257 aa18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 COG2Q14746 738 aa18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
CTHRC1-201ENST00000330295 MYADML2A6NDP7 307 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 DCXO43602 365 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 CD4P01730 458 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 PLS1Q14651 629 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 ARNTL2Q8WYA1 636 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 NOL10Q9BSC4 688 aaKnown RBP18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 HIPK3Q9H422 1215 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 RAI14Q9P0K7 980 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 FOCADQ5VW36 1801 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 UMODL1Q5DID0 1318 aa18.2■□□□□ 0.5
CTHRC1-201ENST00000330295 CST5P28325 142 aaPredicted RBP18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 MB21D1Q8N884 522 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 ANKS1AQ92625 1134 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 SPTBN4Q9H254 2564 aa18.19■□□□□ 0.5
CTHRC1-201ENST00000330295 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 PGK2P07205 417 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 ASGR1P07306 291 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 GRB10Q13322 594 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 POTEBQ6S5H4 581 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 PCSK9Q8NBP7 692 aaKnown RBP18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 AATFQ9NY61 560 aaKnown RBP eCLIP18.18■□□□□ 0.5
CTHRC1-201ENST00000330295 BAG3O95817 575 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 PLCG2P16885 1265 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 CCL23P55773 120 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 TIMM10P62072 90 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 TATDN1Q6P1N9 297 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 RPUSD2Q8IZ73 545 aaKnown RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 UBE2ZQ9H832 354 aaPredicted RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 HMG20BQ9P0W2 317 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 FAM184BQ9ULE4 1060 aa18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 COL4A4P53420 1690 aaPredicted RBP18.17■□□□□ 0.5
CTHRC1-201ENST00000330295 LPXNO60711 386 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 DUSP11O75319 330 aaKnown RBP18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 C6orf222P0C671 652 aaPredicted RBP18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 TAP1Q03518 808 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 ZNF792Q3KQV3 632 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 LEXMQ3ZCV2 418 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 MFSD14AQ96MC6 490 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 MMP19Q99542 508 aa18.16■□□□□ 0.5
CTHRC1-201ENST00000330295 IL9P15248 144 aa18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 SPATA5Q8NB90 893 aa18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 VWCEQ96DN2 955 aa18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 XAGE2Q96GT9 111 aa18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 WNT8AQ9H1J5 351 aa18.15■□□□□ 0.5
CTHRC1-201ENST00000330295 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.14■□□□□ 0.49
CTHRC1-201ENST00000330295 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
CTHRC1-201ENST00000330295 PPP4CP60510 307 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms