RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FAM193AP78312 1265 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 RAD9BQ6WBX8 426 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 EPC1Q9H2F5 836 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 ADGRG1Q9Y653 693 aa17.42■□□□□ 0.38
BRCC3-201ENST00000330045 CNTNAP5Q8WYK1 1306 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 RSRC2Q7L4I2 434 aaKnown RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 CTCFLQ8NI51 663 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 STAMQ92783 540 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 BSDC1Q9NW68 430 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 ATP8B1O43520 1251 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 PROM2Q8N271 834 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 IQUBQ8NA54 791 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 IRX2Q9BZI1 471 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-201ENST00000330045 LZTFL1Q9NQ48 299 aa17.41■□□□□ 0.38
BRCC3-201ENST00000330045 MFAP3LO75121 409 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 SEC31AO94979 1220 aaKnown RBP17.4■□□□□ 0.38
BRCC3-201ENST00000330045 RFC4P35249 363 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
BRCC3-201ENST00000330045 CASZ1Q86V15 1759 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 CASP14P31944 242 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 E2F4Q16254 413 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 CREBRFQ8IUR6 639 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
BRCC3-201ENST00000330045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
BRCC3-201ENST00000330045 XDHP47989 1333 aa17.39■□□□□ 0.38
BRCC3-201ENST00000330045 NLRP5P59047 1200 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
BRCC3-201ENST00000330045 PIK3AP1Q6ZUJ8 805 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 CNGA4Q8IV77 575 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 GOLGA1Q92805 767 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 ORC4O43929 436 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 NMT2O60551 498 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 SCG2P13521 617 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
BRCC3-201ENST00000330045 CC2D1AQ6P1N0 951 aaPredicted RBP17.39■□□□□ 0.37
BRCC3-201ENST00000330045 PYM1Q9BRP8 204 aaKnown RBP17.39■□□□□ 0.37
BRCC3-201ENST00000330045 ITIH6Q6UXX5 1313 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 KIF5CO60282 957 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 GYPCP04921 128 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 NFIXQ14938 502 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 RRAGBQ5VZM2 374 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 RASGRP2Q7LDG7 609 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 NSUN4Q96CB9 384 aaKnown RBP17.38■□□□□ 0.37
BRCC3-201ENST00000330045 CCDC51Q96ER9 411 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 PARD6BQ9BYG5 372 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 MCM7P33993 719 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
BRCC3-201ENST00000330045 FXR1P51114 621 aaKnown RBP eCLIP17.38■□□□□ 0.37
BRCC3-201ENST00000330045 EVX2Q03828 476 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
BRCC3-201ENST00000330045 LIMA1Q9UHB6 759 aaKnown RBP17.38■□□□□ 0.37
BRCC3-201ENST00000330045 LRRC10BA6NIK2 292 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 GTPBP6O43824 516 aaPredicted RBP17.37■□□□□ 0.37
BRCC3-201ENST00000330045 COBLO75128 1261 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 KLRK1P26718 216 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 PFKFB3Q16875 520 aaPredicted RBP17.37■□□□□ 0.37
BRCC3-201ENST00000330045 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
BRCC3-201ENST00000330045 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 LAMB1P07942 1786 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 A0A0U1RQJ8 604 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 N4BP3O15049 544 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 MECOMQ03112 1051 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 KRT31Q15323 416 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 IL17AQ16552 155 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 MTRQ99707 1265 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 CRNKL1Q9BZJ0 848 aaKnown RBP17.37■□□□□ 0.37
BRCC3-201ENST00000330045 ARFGAP3Q9NP61 516 aa17.37■□□□□ 0.37
BRCC3-201ENST00000330045 FECHP22830 423 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 SASH3O75995 380 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 VEGFAP15692 232 aaPredicted RBP17.36■□□□□ 0.37
BRCC3-201ENST00000330045 TXLNAP40222 546 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 SPAG1Q07617 926 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 PAK1Q13153 545 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 ZNF569Q5MCW4 686 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 TAF3Q5VWG9 929 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 SRGAP1Q7Z6B7 1085 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 ATP8A2Q9NTI2 1148 aa17.36■□□□□ 0.37
BRCC3-201ENST00000330045 TNRC6CQ9HCJ0 1690 aaKnown RBP17.35■□□□□ 0.37
BRCC3-201ENST00000330045 ZNF658Q5TYW1 1059 aaPredicted RBP17.35■□□□□ 0.37
BRCC3-201ENST00000330045 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 TMTC1Q8IUR5 882 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 VPS16Q9H269 839 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
BRCC3-201ENST00000330045 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms