RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CIAPIN1Q6FI81 312 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 METTL16Q86W50 562 aaKnown RBP23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 GPKOWQ92917 476 aaPredicted RBP eCLIP23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 TNMDQ9H2S6 317 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 FAM205CA6NFA0 338 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 PPP6R2O75170 966 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 NLRP5P59047 1200 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 SHROOM1Q2M3G4 852 aaPredicted RBP23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 CCDC73Q6ZRK6 1079 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 MRPS27Q92552 414 aaKnown RBP23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 SPZ1Q9BXG8 430 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 GREB1LQ9C091 1923 aaPredicted RBP23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 MAP3K11Q16584 847 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 TNFRSF25Q93038 417 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 TRIM34Q9BYJ4 488 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 BRMS1Q9HCU9 246 aa23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.28■■□□□ 1.32
RIPPLY3-201ENST00000329553 A0A1B0GVL5 298 aa23.27■■□□□ 1.32
RIPPLY3-201ENST00000329553 FAM160A1Q05DH4 1040 aa23.27■■□□□ 1.32
RIPPLY3-201ENST00000329553 PCDHB6Q9Y5E3 794 aa23.27■■□□□ 1.32
RIPPLY3-201ENST00000329553 ADAMTS3O15072 1205 aa23.27■■□□□ 1.31
RIPPLY3-201ENST00000329553 RRP9O43818 475 aaKnown RBP23.27■■□□□ 1.31
RIPPLY3-201ENST00000329553 TYW1BQ6NUM6 668 aa23.27■■□□□ 1.31
RIPPLY3-201ENST00000329553 SH3GLB2Q9NR46 395 aa23.27■■□□□ 1.31
RIPPLY3-201ENST00000329553 PTMAP06454 111 aaKnown RBP23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 SNHG28P0DPA3 235 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 ATP2B1P20020 1258 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 SMARCA1P28370 1054 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 SPDYE2Q495Y8 402 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 CKAP2LQ8IYA6 745 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 CSRNP1Q96S65 589 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 UBA5Q9GZZ9 404 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 USP25Q9UHP3 1055 aa23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 FRMPD2Q68DX3 1309 aaPredicted RBP23.26■■□□□ 1.31
RIPPLY3-201ENST00000329553 NDUFA8P51970 172 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 ATP2B2Q01814 1243 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 WWC2Q6AWC2 1192 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 RBM43Q6ZSC3 357 aaKnown RBP23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 FMR1NBQ8N0W7 255 aaPredicted RBP23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 JMYQ8N9B5 988 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 COL2A1P02458 1487 aaPredicted RBP23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 CMA1P23946 247 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.25■■□□□ 1.31
RIPPLY3-201ENST00000329553 FAM151AQ8WW52 585 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 SHTN1A0MZ66 631 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 RASSF7Q02833 373 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 HEATR3Q7Z4Q2 680 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 ZBED3Q96IU2 234 aaPredicted RBP23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 CLIC6Q96NY7 704 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 BARHL2Q9NY43 387 aa23.24■■□□□ 1.31
RIPPLY3-201ENST00000329553 MYH4Q9Y623 1939 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 CNTNAP1P78357 1384 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 STXBP3O00186 592 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 ADCY5O95622 1261 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 CALML3P27482 149 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 PRELPP51888 382 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 SEPT2Q15019 361 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 TNIP1Q15025 636 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 ASPRV1Q53RT3 343 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 RIOX1Q9H6W3 641 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 KANSL2Q9H9L4 492 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 VEZTQ9HBM0 779 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 R3HCC1Q9Y3T6 440 aaKnown RBP23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 LTBP3Q9NS15 1303 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 KINO60870 393 aaKnown RBP23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 GDF11O95390 407 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 EEF2P13639 858 aaKnown RBP23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 RRP1BQ14684 758 aaKnown RBP23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 PPP4R3BQ5MIZ7 849 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 SIAH1Q8IUQ4 282 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 RRP36Q96EU6 259 aaKnown RBP23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 GPCPD1Q9NPB8 672 aa23.23■■□□□ 1.31
RIPPLY3-201ENST00000329553 JAG1P78504 1218 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 ZNF543Q08ER8 600 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 HSP90AA2PQ14568 343 aaPredicted RBP23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 ABCB5Q2M3G0 1257 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 SHC4Q6S5L8 630 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 BLIDQ8IZY5 108 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 MKL1Q969V6 931 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 PIGSQ96S52 555 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 NYAP2Q9P242 653 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 PCDHA4Q9UN74 947 aa23.22■■□□□ 1.31
RIPPLY3-201ENST00000329553 WNT10BO00744 389 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 WNT7AO00755 349 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 CCDC192P0DO97 292 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 TMEM179Q6ZVK1 233 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 TRIM75PA6NK02 468 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 CUTAO60888 179 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 PFKFB1P16118 471 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 FKBP1CQ5VVH2 108 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 PIK3AP1Q6ZUJ8 805 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 KRI1Q8N9T8 703 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms