RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 EIF2AQ9BY44 585 aaKnown RBP5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 GPHNQ9NQX3 736 aaPredicted RBP5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 NUB1Q9Y5A7 615 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 RAPGEF6Q8TEU7 1601 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 KIAA0100Q14667 2235 aaKnown RBP5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 KDM5BQ9UGL1 1544 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 ZBTB22O15209 634 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 C6orf118Q5T5N4 469 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 RUNDC3BQ96NL0 473 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 EYA3Q99504 573 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 KLC4Q9NSK0 619 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 BACH1O14867 736 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 ASIC2Q16515 512 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 ATP8B2P98198 1209 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 CUL3Q13618 768 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 CCDC13Q8IYE1 715 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 MEIS3Q99687 375 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 PLCD1P51178 756 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 LGSNQ5TDP6 509 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 KLHL29Q96CT2 875 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 KIAA1468Q9P260 1216 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 ZBTB21Q9ULJ3 1066 aa5.9□□□□□ -1.46
SDR42E1-201ENST00000328945 LMNB1P20700 586 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 LMNB2Q03252 620 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PRRC2BQ5JSZ5 2229 aaKnown RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 AKNAD1Q5T1N1 836 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 FNBP4Q8N3X1 1017 aaPredicted RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 LARGE2Q8N3Y3 721 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PKD2L1Q9P0L9 805 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 COL17A1Q9UMD9 1497 aaPredicted RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 ABCC2Q92887 1545 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 ARHGAP27Q6ZUM4 889 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 SCYL3Q8IZE3 742 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PDLIM2Q96JY6 352 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 OSBPL9Q96SU4 736 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PSMB7Q99436 277 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PALMDQ9NP74 551 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 TACC3Q9Y6A5 838 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 KRIT1O00522 736 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 RPL13P26373 211 aaKnown RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PSMD2Q13200 908 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 PPP4R1Q8TF05 950 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 DONSONQ9NYP3 566 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 ITIH3Q06033 890 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 INTS9Q9NV88 658 aaKnown RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 USP21Q9UK80 565 aa5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 NSFL1CQ9UNZ2 370 aaKnown RBP5.9□□□□□ -1.47
SDR42E1-201ENST00000328945 KCNJ18B7U540 433 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 KCNJ12Q14500 433 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 PSMD6Q15008 389 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 LRRC59Q96AG4 307 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 VPS16Q9H269 839 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 HAUS2Q9NVX0 235 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 TAB2Q9NYJ8 693 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 GUCY2DQ02846 1103 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 TRIML1Q8N9V2 468 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 TUBB6Q9BUF5 446 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 UFL1O94874 794 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 PHBP35232 272 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 RWDD2BP57060 319 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CSGALNACT2Q8N6G5 542 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CACTINQ8WUQ7 758 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 VPS37BQ9H9H4 285 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 SAP30BPQ9UHR5 308 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 GINS2Q9Y248 185 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ABCC5O15440 1437 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 NELFBQ8WX92 580 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ESR2Q92731 530 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 SART1O43290 800 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ATP5HO75947 161 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 APBA3O96018 575 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 MAGEA1P43355 309 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 EIF6P56537 245 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 NLRP7Q8WX94 980 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ANKRD2Q9GZV1 360 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 HNRNPCP07910 306 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CCDC93Q567U6 631 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 OR8K1Q8NGG5 319 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CHCHD3Q9NX63 227 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 NRBP1Q9UHY1 535 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CFAP73A6NFT4 308 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CUL1Q13616 776 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ATP2A3Q93084 1043 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 HAUS8Q9BT25 410 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CD2APQ9Y5K6 639 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 DIDO1Q9BTC0 2240 aaKnown RBP5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 KIAA0556O60303 1618 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 SLC20A2Q08357 652 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 PNOCQ13519 176 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 ANKRD7Q92527 254 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 KIFAP3Q92845 792 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 RILPQ96NA2 401 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 SLC4A4Q9Y6R1 1079 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 UHRF1BP1LA0JNW5 1464 aa5.89□□□□□ -1.47
SDR42E1-201ENST00000328945 PASKQ96RG2 1323 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms