RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 A0A1W2PQ27 194 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 A0A1W2PQ64 194 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 A0A1W2PQD8 194 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 USP17L5A8MUK1 530 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
SYNM-201ENST00000328642 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
SYNM-201ENST00000328642 MLKLQ8NB16 471 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 CEP95Q96GE4 821 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 TMEM232C9JQI7 657 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 KRT9P35527 623 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 GPS2Q13227 327 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 VPS72Q15906 364 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 NSMFQ6X4W1 530 aa18.03■□□□□ 0.48
SYNM-201ENST00000328642 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
SYNM-201ENST00000328642 PPARDQ03181 441 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 PRR16Q569H4 304 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 TAF3Q5VWG9 929 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 SHC4Q6S5L8 630 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 CCDC102AQ96A19 550 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 PCDHA1Q9Y5I3 950 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 PRR29P0C7W0 189 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 SLURP2P0DP57 97 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 ICA1Q05084 483 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 PAK1Q13153 545 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 LRRC41Q15345 812 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 CCDC144BQ3MJ40 725 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 DCAF17Q5H9S7 520 aaPredicted RBP18.02■□□□□ 0.48
SYNM-201ENST00000328642 RASGRP2Q7LDG7 609 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 FMR1NBQ8N0W7 255 aaPredicted RBP18.02■□□□□ 0.48
SYNM-201ENST00000328642 SRBD1Q8N5C6 995 aaKnown RBP18.02■□□□□ 0.48
SYNM-201ENST00000328642 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 PRIMPOLQ96LW4 560 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 CRACR2AQ9BSW2 395 aa18.02■□□□□ 0.48
SYNM-201ENST00000328642 SF3B3Q15393 1217 aaKnown RBP18.02■□□□□ 0.47
SYNM-201ENST00000328642 PTPROQ16827 1216 aa18.02■□□□□ 0.47
SYNM-201ENST00000328642 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.47
SYNM-201ENST00000328642 LRRC8AQ8IWT6 810 aa18.02■□□□□ 0.47
SYNM-201ENST00000328642 UBE2Q2Q8WVN8 375 aa18.02■□□□□ 0.47
SYNM-201ENST00000328642 SPAG5Q96R06 1193 aa18.02■□□□□ 0.47
SYNM-201ENST00000328642 MAP7D2Q96T17 732 aa18.02■□□□□ 0.47
SYNM-201ENST00000328642 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.47
SYNM-201ENST00000328642 RRP9O43818 475 aaKnown RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 RNASE9P60153 205 aaKnown RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 RDH13Q8NBN7 331 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 FERMT2Q96AC1 680 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 PSTPIP2Q9H939 334 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 MACROD2A1Z1Q3 448 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 TMCO3Q6UWJ1 677 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 TDRD7Q8NHU6 1098 aaKnown RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 FAM207AQ9NSI2 230 aaPredicted RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 LUC7L2Q9Y383 392 aaKnown RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 DYNC1I1O14576 645 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
SYNM-201ENST00000328642 RXRBP28702 533 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 PLEKHA4Q9H4M7 779 aa18.01■□□□□ 0.47
SYNM-201ENST00000328642 PPP2R5BQ15173 497 aa18■□□□□ 0.47
SYNM-201ENST00000328642 TMTC3Q6ZXV5 915 aa18■□□□□ 0.47
SYNM-201ENST00000328642 RUFY1Q96T51 708 aa18■□□□□ 0.47
SYNM-201ENST00000328642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18■□□□□ 0.47
SYNM-201ENST00000328642 ZBTB7AO95365 584 aa18■□□□□ 0.47
SYNM-201ENST00000328642 AOC3Q16853 763 aa18■□□□□ 0.47
SYNM-201ENST00000328642 NLRC4Q9NPP4 1024 aa18■□□□□ 0.47
SYNM-201ENST00000328642 TMEM260Q9NX78 707 aa18■□□□□ 0.47
SYNM-201ENST00000328642 SEMA3EO15041 775 aa18■□□□□ 0.47
SYNM-201ENST00000328642 DDAH1O94760 285 aa18■□□□□ 0.47
SYNM-201ENST00000328642 RHOXF2BP0C7M4 288 aa18■□□□□ 0.47
SYNM-201ENST00000328642 SSR1P43307 286 aaKnown RBP18■□□□□ 0.47
SYNM-201ENST00000328642 RHOXF2Q9BQY4 288 aa18■□□□□ 0.47
SYNM-201ENST00000328642 MAN1B1Q9UKM7 699 aa18■□□□□ 0.47
SYNM-201ENST00000328642 KRT25Q7Z3Z0 450 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 CCDC175P0C221 793 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 TNIP1Q15025 636 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 BRIP1Q9BX63 1249 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 GDAQ9Y2T3 454 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 KIF2AO00139 706 aaPredicted RBP17.99■□□□□ 0.47
SYNM-201ENST00000328642 NEK8Q86SG6 692 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 CTAGE1Q96RT6 745 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
SYNM-201ENST00000328642 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 TMCO5BA8MYB1 307 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 HOXA13P31271 388 aaPredicted RBP17.98■□□□□ 0.47
SYNM-201ENST00000328642 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
SYNM-201ENST00000328642 GJA10Q969M2 543 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 BCL9O00512 1426 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 MEIS1O00470 390 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 SPAG1Q07617 926 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 GRM1Q13255 1194 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms