RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 PABPN1LA6NDY0 278 aaKnown RBP12.71□□□□□ -0.38
COL4A5-201ENST00000328300 LMAN1P49257 510 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 ASIC2Q16515 512 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 MSL1Q68DK7 614 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 TNFAIP3P21580 790 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 BIRC3Q13489 604 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 TTLL6Q8N841 843 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.38
COL4A5-201ENST00000328300 FANCCQ00597 558 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 SLC9C1Q4G0N8 1177 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 DCAF17Q5H9S7 520 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 STAMBPO95630 424 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 METTL14Q9HCE5 456 aaKnown RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 CHMP2AO43633 222 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 JAK2O60674 1132 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 OSBPP22059 807 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 ORC2Q13416 577 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-201ENST00000328300 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 APOA5Q6Q788 366 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 PODNQ7Z5L7 613 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
COL4A5-201ENST00000328300 PRPF3O43395 683 aaKnown RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 CUL4AQ13619 759 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 IFNAR1P17181 557 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ARHGAP6O43182 974 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 SEPT2Q15019 361 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 USH1GQ495M9 461 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ARFGAP3Q9NP61 516 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 NRBP2Q9NSY0 501 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 SH2B2O14492 632 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 DNA2P51530 1060 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ZNF75DP51815 510 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ZHX1Q9UKY1 873 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ALX1Q15699 326 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 GPR162Q16538 588 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
COL4A5-201ENST00000328300 M0R2C6 588 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 NELFBQ8WX92 580 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
COL4A5-201ENST00000328300 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC14Q49A88 953 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 FLOT1O75955 427 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CYP21A2P08686 494 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 GAP43P17677 238 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms