RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 NCAPG2Q86XI2 1143 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 REPS2Q8NFH8 660 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 CCDC17Q96LX7 622 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 CWC22Q9HCG8 908 aaKnown RBP9.74□□□□□ -0.85
CCNC-201ENST00000326298 HOXC10Q9NYD6 342 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 ADAMTS5Q9UNA0 930 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 RIPK3Q9Y572 518 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 IGKV6D-41A0A0C4DH26 115 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 CYBAP13498 195 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 TAL1P17542 331 aaPredicted RBP9.74□□□□□ -0.85
CCNC-201ENST00000326298 CNGA1P29973 690 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 ZSCAN25Q6NSZ9 544 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 IFNL3Q8IZI9 196 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 KANSL2Q9H9L4 492 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 ARPP21Q9UBL0 812 aaPredicted RBP9.74□□□□□ -0.85
CCNC-201ENST00000326298 ZNF214Q9UL59 606 aaPredicted RBP9.74□□□□□ -0.85
CCNC-201ENST00000326298 NR2E3Q9Y5X4 410 aa9.74□□□□□ -0.85
CCNC-201ENST00000326298 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 VWA5AO00534 786 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 WDR46O15213 610 aaKnown RBP9.73□□□□□ -0.85
CCNC-201ENST00000326298 FAM47AQ5JRC9 791 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 LPAR1Q92633 364 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 LENG1Q96BZ8 264 aaPredicted RBP9.73□□□□□ -0.85
CCNC-201ENST00000326298 CEP95Q96GE4 821 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 GDF15Q99988 308 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 IVNS1ABPQ9Y6Y0 642 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 ROBO3Q96MS0 1386 aa9.73□□□□□ -0.85
CCNC-201ENST00000326298 ZNFX1Q9P2E3 1918 aaKnown RBP9.73□□□□□ -0.85
CCNC-201ENST00000326298 F5H6K3 240 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 NDUFB10O96000 172 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 APPP05067 770 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 MX1P20591 662 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 KLRC3Q07444 240 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 GJC2Q5T442 439 aaPredicted RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 DPP9Q86TI2 863 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 DDX20Q9UHI6 824 aaKnown RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 NMT2O60551 498 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 TDO2P48775 406 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 IRX5P78411 483 aaPredicted RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 MAML3Q96JK9 1138 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 SENP6Q9GZR1 1112 aaPredicted RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 MKNK2Q9HBH9 465 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
CCNC-201ENST00000326298 TTC41PQ6P2S7 1318 aa9.72□□□□□ -0.85
CCNC-201ENST00000326298 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.85
CCNC-201ENST00000326298 MFSD14CQ5VZR4 134 aa9.71□□□□□ -0.85
CCNC-201ENST00000326298 SHCBP1Q8NEM2 672 aa9.71□□□□□ -0.85
CCNC-201ENST00000326298 ZNF236Q9UL36 1845 aa9.71□□□□□ -0.85
CCNC-201ENST00000326298 GLRX3O76003 335 aaKnown RBP9.71□□□□□ -0.86
CCNC-201ENST00000326298 IGHDP01880 384 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 STAT3P40763 770 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 GIMAP6Q6P9H5 292 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 AMOTL1Q8IY63 956 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
CCNC-201ENST00000326298 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 GPATCH3Q96I76 525 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 FAM227BQ96M60 508 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 MTMR4Q9NYA4 1195 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 NYAP2Q9P242 653 aa9.71□□□□□ -0.86
CCNC-201ENST00000326298 STRNO43815 780 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
CCNC-201ENST00000326298 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
CCNC-201ENST00000326298 OLFML2BQ68BL8 750 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 RIOX2Q8IUF8 465 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 MB21D1Q8N884 522 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 MROH8Q9H579 483 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 IL17RBQ9NRM6 502 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 MYH4Q9Y623 1939 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 A0A0D9SFI3 127 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 ADCY6O43306 1168 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
CCNC-201ENST00000326298 PTGS1P23219 599 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 PDE1AP54750 535 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 SNAP25P60880 206 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 PPARAQ07869 468 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
CCNC-201ENST00000326298 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 FERMT2Q96AC1 680 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 FGD4Q96M96 766 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 LNPKQ9C0E8 428 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 SH2D4AQ9H788 454 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
CCNC-201ENST00000326298 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
CCNC-201ENST00000326298 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
CCNC-201ENST00000326298 FCER1AP12319 257 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms