RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
NCL-201ENST00000322723 DZIP1Q86YF9 867 aaKnown RBP13.68□□□□□ -0.22
NCL-201ENST00000322723 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 FLT1P17948 1338 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
NCL-201ENST00000322723 PBX1P40424 430 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 SEMA3FQ13275 785 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
NCL-201ENST00000322723 LDHCP07864 332 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.222e-7■■□□□ 13.8
NCL-201ENST00000322723 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 DPF2Q92785 391 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 IFNKQ9P0W0 207 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 STXBP3O00186 592 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
NCL-201ENST00000322723 PLCD1P51178 756 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
NCL-201ENST00000322723 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 FECHP22830 423 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 KIF5BP33176 963 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 PAGE5Q96GU1 130 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 MCM9Q9NXL9 1143 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 BAG3O95817 575 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 ST5P78524 1137 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 E4F1Q66K89 784 aaPredicted RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 MTRQ99707 1265 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 TFAP4Q01664 338 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 TBC1D22AQ8WUA7 517 aa13.67□□□□□ -0.22
NCL-201ENST00000322723 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
NCL-201ENST00000322723 USP27XA6NNY8 438 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 GNAQP50148 359 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
NCL-201ENST00000322723 BARHL2Q9NY43 387 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 EP400Q96L91 3159 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 BIN1O00499 593 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 CALML3P27482 149 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 DYNLL2Q96FJ2 89 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 PRPHP41219 470 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
NCL-201ENST00000322723 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
NCL-201ENST00000322723 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 ATP6V0A2Q9Y487 856 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
NCL-201ENST00000322723 MYH7BA7E2Y1 1941 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 PLCG2P16885 1265 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 HSPA1LP34931 641 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
NCL-201ENST00000322723 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 ESYT2A0FGR8 921 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 NRDCO43847 1150 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 BTDP43251 543 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 SPECC1Q5M775 1068 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 SKILP12757 684 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 LONP1P36776 959 aaKnown RBP13.65□□□□□ -0.22
NCL-201ENST00000322723 TPM4P67936 248 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 NR1I3Q14994 352 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
NCL-201ENST00000322723 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
NCL-201ENST00000322723 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
NCL-201ENST00000322723 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
NCL-201ENST00000322723 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
NCL-201ENST00000322723 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
NCL-201ENST00000322723 CDK8P49336 464 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 PTGDRQ13258 359 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 KAT14Q9H8E8 782 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 LAD1O00515 517 aa13.64□□□□□ -0.23
NCL-201ENST00000322723 PLSCR1O15162 318 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms