RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FRMD3A2A2Y4 597 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CUTAO60888 179 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 SNX29Q8TEQ0 813 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 TBC1D23Q9NUY8 699 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 MAGEA9P43362 315 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 COL17A1Q9UMD9 1497 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CFAP221Q4G0U5 840 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 SPZ1Q9BXG8 430 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 RASSF10A6NK89 507 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CHMP4BP1P59074 171 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 KDM3AQ9Y4C1 1321 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 H0YCG3 227 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CRCPO75575 148 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 P4HA1P13674 534 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CCDC93Q567U6 631 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 FGD4Q96M96 766 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 DISP3Q9P2K9 1392 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 E7EVH7 732 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CREB3L3Q68CJ9 461 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 MAGEF1Q9HAY2 307 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 PCP11498 1178 aaKnown RBP10.66□□□□□ -0.7
COL12A1-201ENST00000322507 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-201ENST00000322507 NT5C3AQ9H0P0 336 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 DAB1O75553 588 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL12A1-201ENST00000322507 PPP1R2P3Q6NXS1 205 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 CEP70Q8NHQ1 597 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 UBLCP1Q8WVY7 318 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-201ENST00000322507 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 FAM129AQ9BZQ8 928 aa10.66□□□□□ -0.7
COL12A1-201ENST00000322507 OAS2P29728 719 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 FAM71BQ8TC56 605 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 EFHD1Q9BUP0 239 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 ANGEL1Q9UNK9 670 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 TRPC1P48995 793 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 BRD3Q15059 726 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 WAPLQ7Z5K2 1190 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 TUBB6Q9BUF5 446 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 YTHDC2Q9H6S0 1430 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 STX12Q86Y82 276 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 LRRC59Q96AG4 307 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 GUCA1BQ9UMX6 200 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 RASGRF2O14827 1237 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 CHPF2Q9P2E5 772 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 SEPT3Q9UH03 358 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 LDHBP07195 334 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 HPDP32754 393 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 ITIH3Q06033 890 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 CAPRIN2Q6IMN6 1127 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 NGLY1Q96IV0 654 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 FNBP1Q96RU3 617 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 EIF3CLB5ME19 914 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 PAK2Q13177 524 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 EIF3CQ99613 913 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 EDC4Q6P2E9 1401 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 THUMPD2Q9BTF0 503 aaKnown RBP10.65□□□□□ -0.7
COL12A1-201ENST00000322507 KLHL31Q9H511 634 aa10.65□□□□□ -0.7
COL12A1-201ENST00000322507 SLC30A9Q6PML9 568 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 WDR62O43379 1518 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 MAP3K10Q02779 954 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 DNM1Q05193 864 aaKnown RBP10.65□□□□□ -0.71
COL12A1-201ENST00000322507 FAM204AQ9H8W3 233 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.71
COL12A1-201ENST00000322507 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 HAND2P61296 217 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 FSCBQ5H9T9 825 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ACEP12821 1306 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 HACE1Q8IYU2 909 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ATP6V0A4Q9HBG4 840 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ANKRD20A3Q5VUR7 823 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 CTTNQ14247 550 aaKnown RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF569Q5MCW4 686 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 DHX58Q96C10 678 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 FAM81BQ96LP2 452 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF711Q9Y462 761 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms