RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 PDE6AP16499 860 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 ICA1Q05084 483 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 TJAP1Q5JTD0 557 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 SLC9C2Q5TAH2 1124 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 ZKSCAN2Q63HK3 967 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 AACSQ86V21 672 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 TINF2Q9BSI4 451 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 VCPKMTQ9H867 229 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 ARHGEF10LQ9HCE6 1279 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 DCP1AQ9NPI6 582 aaPredicted RBP23.73■■□□□ 1.39
SSNA1-201ENST00000322310 NRBP1Q9UHY1 535 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 TMX2Q9Y320 296 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 SLC25A27O95847 323 aa23.72■■□□□ 1.39
SSNA1-201ENST00000322310 FAAP100Q0VG06 881 aa23.72■■□□□ 1.39
SSNA1-201ENST00000322310 LCORLQ8N3X6 602 aa23.72■■□□□ 1.39
SSNA1-201ENST00000322310 FBXO28Q9NVF7 368 aa23.72■■□□□ 1.39
SSNA1-201ENST00000322310 PARP14Q460N5 1801 aa23.71■■□□□ 1.39
SSNA1-201ENST00000322310 ZNF532Q9HCE3 1301 aa23.71■■□□□ 1.39
SSNA1-201ENST00000322310 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.71■■□□□ 1.39
SSNA1-201ENST00000322310 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.71■■□□□ 1.39
SSNA1-201ENST00000322310 ZNF865P0CJ78 1059 aaPredicted RBP23.71■■□□□ 1.39
SSNA1-201ENST00000322310 ZNF792Q3KQV3 632 aa23.71■■□□□ 1.39
SSNA1-201ENST00000322310 ZNF576Q9H609 170 aa23.71■■□□□ 1.39
SSNA1-201ENST00000322310 EXOC6BQ9Y2D4 811 aa23.71■■□□□ 1.39
SSNA1-201ENST00000322310 ROBO3Q96MS0 1386 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 SMIM22K7EJ46 135 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 WDR46O15213 610 aaKnown RBP23.7■■□□□ 1.38
SSNA1-201ENST00000322310 ADAMTS4O75173 837 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 AKR1A1P14550 325 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 KCTD2Q14681 263 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 RIOX2Q8IUF8 465 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 SH2D4AQ9H788 454 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 SWAP70Q9UH65 585 aa23.7■■□□□ 1.38
SSNA1-201ENST00000322310 ZNFX1Q9P2E3 1918 aaKnown RBP23.7■■□□□ 1.38
SSNA1-201ENST00000322310 COL11A1P12107 1806 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-201ENST00000322310 TCRBV5S4A2TA0A5A2 114 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 TNFRSF10AO00220 468 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 COL9A1P20849 921 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 ACLYP53396 1101 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 ANKRD33Q7Z3H0 272 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 TIFAQ96CG3 184 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.69■■□□□ 1.38
SSNA1-201ENST00000322310 STARD7Q9NQZ5 370 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 ADAMTS5Q9UNA0 930 aa23.69■■□□□ 1.38
SSNA1-201ENST00000322310 SYNRGQ9UMZ2 1314 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 DCDC2CA8MYV0 355 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 TTF1Q15361 905 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-201ENST00000322310 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 PPM1EQ8WY54 764 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 ARMT1Q9H993 441 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 IL1RAPL2Q9NP60 686 aa23.68■■□□□ 1.38
SSNA1-201ENST00000322310 DIS3Q9Y2L1 958 aaKnown RBP23.68■■□□□ 1.38
SSNA1-201ENST00000322310 PLXNA1Q9UIW2 1896 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 CYP2D7A0A087X1C5 515 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 GOLIM4O00461 696 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 PRKAB2O43741 272 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 PBX2P40425 430 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 TOX2Q96NM4 488 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 CNPY2Q9Y2B0 182 aa23.67■■□□□ 1.38
SSNA1-201ENST00000322310 GRXCR1A8MXD5 290 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 VWA5AO00534 786 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 TIMP1P01033 207 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 RLBP1P12271 317 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 EEF2P13639 858 aaKnown RBP23.66■■□□□ 1.38
SSNA1-201ENST00000322310 STAT3P40763 770 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 SLFNL1Q499Z3 407 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 CEP85Q6P2H3 762 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 NUP133Q8WUM0 1156 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 DNAJC2Q99543 621 aaKnown RBP23.66■■□□□ 1.38
SSNA1-201ENST00000322310 TSEN34Q9BSV6 310 aaKnown RBP23.66■■□□□ 1.38
SSNA1-201ENST00000322310 RAPGEFL1Q9UHV5 662 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 TBX21Q9UL17 535 aa23.66■■□□□ 1.38
SSNA1-201ENST00000322310 ZNF214Q9UL59 606 aaPredicted RBP23.66■■□□□ 1.38
SSNA1-201ENST00000322310 MYH8P13535 1937 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 MYADML2A6NDP7 307 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 IRX5P78411 483 aaPredicted RBP23.65■■□□□ 1.38
SSNA1-201ENST00000322310 KCNA10Q16322 511 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 C16orf59Q7L2K0 433 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 FTSJ3Q8IY81 847 aaKnown RBP23.65■■□□□ 1.38
SSNA1-201ENST00000322310 REPS2Q8NFH8 660 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 PPP1R9AQ9ULJ8 1098 aa23.65■■□□□ 1.38
SSNA1-201ENST00000322310 RAD21O60216 631 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 CDK8P49336 464 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 FAM83BQ5T0W9 1011 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 ERC1Q8IUD2 1116 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 KLHDC9Q8NEP7 349 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 PBX4Q9BYU1 374 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 PRDM12Q9H4Q4 367 aa23.64■■□□□ 1.37
SSNA1-201ENST00000322310 MBD4O95243 580 aa23.63■■□□□ 1.37
SSNA1-201ENST00000322310 SNAI1O95863 264 aaPredicted RBP23.63■■□□□ 1.37
SSNA1-201ENST00000322310 TMEM240Q5SV17 173 aa23.63■■□□□ 1.37
SSNA1-201ENST00000322310 CCSAPQ6IQ19 270 aaPredicted RBP23.63■■□□□ 1.37
SSNA1-201ENST00000322310 MFSD5Q6N075 450 aa23.63■■□□□ 1.37
SSNA1-201ENST00000322310 CCDC129Q6ZRS4 1044 aa23.63■■□□□ 1.37
SSNA1-201ENST00000322310 CCDC17Q96LX7 622 aa23.63■■□□□ 1.37
SSNA1-201ENST00000322310 GAS2L1Q99501 681 aaPredicted RBP23.63■■□□□ 1.37
SSNA1-201ENST00000322310 ZHX1Q9UKY1 873 aaPredicted RBP23.63■■□□□ 1.37
SSNA1-201ENST00000322310 MOXD2PA6NHM9 499 aa23.62■■□□□ 1.37
SSNA1-201ENST00000322310 C12orf60Q5U649 245 aa23.62■■□□□ 1.37
SSNA1-201ENST00000322310 FAM184BQ9ULE4 1060 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms