RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CCDC12Q8WUD4 166 aaPredicted RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 MTRQ99707 1265 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 NOL10Q9BSC4 688 aaKnown RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 ADD3Q9UEY8 706 aaKnown RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 FAM205AQ6ZU69 1335 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 PP2D1A8MPX8 630 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 TEX35Q5T0J7 233 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 AMIGO3Q86WK7 504 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 IL17RBQ9NRM6 502 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 ARPP21Q9UBL0 812 aaPredicted RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 GOLGA8HP0CJ92 632 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 PCP11498 1178 aaKnown RBP19.72■□□□□ 0.75
COL9A1-201ENST00000320755 KIF5BP33176 963 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 GRIK5Q16478 980 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 RAD9BQ6WBX8 426 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 SH3RF3Q8TEJ3 882 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-201ENST00000320755 ANKRD2Q9GZV1 360 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 SLC10A5Q5PT55 438 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 HEATR3Q7Z4Q2 680 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 TAB2Q9NYJ8 693 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 GDAQ9Y2T3 454 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 SEMA3EO15041 775 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 RASGRP2Q7LDG7 609 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 BLIDQ8IZY5 108 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 TGFBRAP1Q8WUH2 860 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 EEF2KMTQ96G04 330 aa19.72■□□□□ 0.75
COL9A1-201ENST00000320755 GTPBP4Q9BZE4 634 aaKnown RBP19.72■□□□□ 0.75
COL9A1-201ENST00000320755 CCDC175P0C221 793 aa19.71■□□□□ 0.75
COL9A1-201ENST00000320755 H2AFXP16104 143 aaPredicted RBP19.71■□□□□ 0.75
COL9A1-201ENST00000320755 TYW1BQ6NUM6 668 aa19.71■□□□□ 0.75
COL9A1-201ENST00000320755 SEC31AO94979 1220 aaKnown RBP19.71■□□□□ 0.75
COL9A1-201ENST00000320755 LDHBP07195 334 aaKnown RBP19.71■□□□□ 0.75
COL9A1-201ENST00000320755 ZBTB9Q96C00 473 aa19.71■□□□□ 0.75
COL9A1-201ENST00000320755 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
COL9A1-201ENST00000320755 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
COL9A1-201ENST00000320755 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 TADA3O75528 432 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 TSPY3P0CV98 308 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 TSPY8P0CW00 308 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 STAT6P42226 847 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 FXR1P51114 621 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL9A1-201ENST00000320755 KRT31Q15323 416 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 E2F4Q16254 413 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 INF2Q27J81 1249 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 CDKAL1Q5VV42 579 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 MAPKAPK5Q8IW41 473 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 NELFBQ8WX92 580 aa19.7■□□□□ 0.74
COL9A1-201ENST00000320755 GOLGA6L9A6NEM1 432 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 PPP2R3AQ06190 1150 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 NFIXQ14938 502 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 ZNF444Q8N0Y2 327 aaPredicted RBP19.69■□□□□ 0.74
COL9A1-201ENST00000320755 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 CTAGE1Q96RT6 745 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 NUP88Q99567 741 aaPredicted RBP19.69■□□□□ 0.74
COL9A1-201ENST00000320755 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
COL9A1-201ENST00000320755 C12orf60Q5U649 245 aa19.69■□□□□ 0.74
COL9A1-201ENST00000320755 TRIM49BA6NDI0 452 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 RPN1P04843 607 aaKnown RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 TXLNAP40222 546 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 PAK1Q13153 545 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 TMCO3Q6UWJ1 677 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 BARGINQ6ZT62 677 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 PANX2Q96RD6 677 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 SRRTQ9BXP5 876 aaKnown RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 TMEM60Q9H2L4 133 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 VAT1LQ9HCJ6 419 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 ADGRG1Q9Y653 693 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 RNF225M0QZC1 329 aaPredicted RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 GYPCP04921 128 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 CALML3P27482 149 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 BMS1Q14692 1282 aaKnown RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 SBK1Q52WX2 424 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 ACRBPQ8NEB7 543 aa19.68■□□□□ 0.74
COL9A1-201ENST00000320755 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
COL9A1-201ENST00000320755 EFCAB8A8MWE9 144 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 GTPBP6O43824 516 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-201ENST00000320755 PRCPP42785 496 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 MAP3K9P80192 1104 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 ARGLU1Q9NWB6 273 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-201ENST00000320755 CCNL1Q9UK58 526 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-201ENST00000320755 MFAP3LO75121 409 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 RPS6KA4O75676 772 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 TPM1P09493 284 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 SPTY2D1Q68D10 685 aaPredicted RBP19.67■□□□□ 0.74
COL9A1-201ENST00000320755 DTHD1Q6ZMT9 781 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 PUF60Q9UHX1 559 aaKnown RBP19.67■□□□□ 0.74
COL9A1-201ENST00000320755 PCDHA4Q9UN74 947 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 ABL1P00519 1130 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 TM4SF1P30408 202 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 ZNF569Q5MCW4 686 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 KIFC2Q96AC6 838 aa19.67■□□□□ 0.74
COL9A1-201ENST00000320755 UBA7P41226 1012 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 WWC2Q6AWC2 1192 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 FHOD1Q9Y613 1164 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms