RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 PTPREP23469 700 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 TFAP4Q01664 338 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 TRIM32Q13049 653 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
CCDC65-202ENST00000320516 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 TTLL1O95922 423 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
CCDC65-202ENST00000320516 RGS2P41220 211 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 GRB14Q14449 540 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 SHCBP1Q8NEM2 672 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
CCDC65-202ENST00000320516 IL17RBQ9NRM6 502 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 PPP1R9AQ9ULJ8 1098 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 SLC15A5A6NIM6 579 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 ORC4O43929 436 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 SGPL1O95470 568 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 HOXC6P09630 235 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 NOVP48745 357 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
CCDC65-202ENST00000320516 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 GMCL1P1Q8NEA9 526 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
CCDC65-202ENST00000320516 APBA2Q99767 749 aa11.79□□□□□ -0.52
CCDC65-202ENST00000320516 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 HIP1O00291 1037 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 VWA5AO00534 786 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 IGHA2P01877 340 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 ERCC3P19447 782 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 CCL14Q16627 93 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
CCDC65-202ENST00000320516 LRRC47Q8N1G4 583 aaKnown RBP11.78□□□□□ -0.52
CCDC65-202ENST00000320516 DEFB118Q96PH6 123 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC65-202ENST00000320516 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 ZNF214Q9UL59 606 aaPredicted RBP11.78□□□□□ -0.52
CCDC65-202ENST00000320516 RPTORQ8N122 1335 aa11.78□□□□□ -0.52
CCDC65-202ENST00000320516 TSPY2A6NKD2 308 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 STRNO43815 780 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 RAD21O60216 631 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.52
CCDC65-202ENST00000320516 WDR78Q5VTH9 848 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 IL25Q9H293 177 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 MROH8Q9H579 483 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.52
CCDC65-202ENST00000320516 IVNS1ABPQ9Y6Y0 642 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 ZNF236Q9UL36 1845 aa11.77□□□□□ -0.52
CCDC65-202ENST00000320516 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.53
CCDC65-202ENST00000320516 NMT2O60551 498 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
CCDC65-202ENST00000320516 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.53
CCDC65-202ENST00000320516 CAPN2P17655 700 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 PLS1Q14651 629 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 NPLOC4Q8TAT6 608 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
CCDC65-202ENST00000320516 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
CCDC65-202ENST00000320516 RANBP6O60518 1105 aaKnown RBP11.76□□□□□ -0.53
CCDC65-202ENST00000320516 SLC25A27O95847 323 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 ADORA2AP29274 412 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 HAND2P61296 217 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 CACNB2Q08289 660 aaPredicted RBP11.76□□□□□ -0.53
CCDC65-202ENST00000320516 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 PRPF38BQ5VTL8 546 aaKnown RBP11.76□□□□□ -0.53
CCDC65-202ENST00000320516 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
CCDC65-202ENST00000320516 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
CCDC65-202ENST00000320516 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
CCDC65-202ENST00000320516 COBLO75128 1261 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 PCP11498 1178 aaKnown RBP11.75□□□□□ -0.53
CCDC65-202ENST00000320516 BMP3P12645 472 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 STAT3P40763 770 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 NCAPG2Q86XI2 1143 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 GMCL1Q96IK5 515 aa11.75□□□□□ -0.53
CCDC65-202ENST00000320516 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 SLC38A10Q9HBR0 1119 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 FEM1BQ9UK73 627 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
CCDC65-202ENST00000320516 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
CCDC65-202ENST00000320516 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
CCDC65-202ENST00000320516 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
CCDC65-202ENST00000320516 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
CCDC65-202ENST00000320516 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms